myRT

myRT report for GCA_009556655.1_ASM955665v1

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Seq: CP045662.1 Klebsiella pneumoniae strain SMU18037509 plasmid unnamed1, complete sequence (143263 bp)
Overview 1 RT 1: 107838-111697 bp Neighborhood of RT #1 [107838, 111697] HHA RVT-GII INT_Cre_C Feature: gene Location: 107838-108092 bp Ori: QGA05919.1 Feature: domain Description: HHA Location: 107889-108072 bp Feature: domain Description: HHA Location: 1 07889-1 08072 bp Feature: gene Location: 108357-108608 bp Feature: gene Location: 108608-110092 bp Ori: QGA05921.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109010-109700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0901 0-1 09700 bp Feature: gene Location: 110178-111314 bp Ori: QGA05922.1 Feature: domain Description: INT_Cre_C Location: 110601-111255 bp Feature: domain Description: INT_Cre_C Location: 1 1 0601 -1 1 1 255 bp Feature: gene Location: 111380-111697 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HHA (pfam05321), RVT-GII, INT_Cre_C (cd00799)

Seq: CP045661.1 Klebsiella pneumoniae strain SMU18037509 chromosome, complete genome (5365096 bp)
Overview 1 RT 1: 724693-732387 bp 2 RT 2: 2173979-2177724 bp 3 RT 3: 2819868-2824003 bp 4 RT 4: 3184259-3187089 bp 5 RT 5: 3539426-3543467 bp Neighborhood of RT #1 [724693, 732387] FimC FimD RVT-UG4 EAL Neighborhood of RT #2 [2173979, 2177726] RVT-GII PRK10276 umuC Neighborhood of RT #3 [2819868, 2824003] umuC PRK10276 RVT-GII Neighborhood of RT #4 [3184259, 3187100] PRK10276 RVT-GII DinI Neighborhood of RT #5 [3539426, 3544322] RVT-GII Phage_GPA Feature: gene Location: 724693-725457 bp Ori: QGA01493.1 Feature: domain Description: FimC Location: 724738-725440 bp Feature: domain Description: FimC Location: 72 4738-72 5440 bp Feature: gene Location: 725504-728098 bp Ori: QGA05621.1 Feature: domain Description: FimD Location: 725546-728087 bp Feature: domain Description: FimD Location: 72 5546-72 8087 bp Feature: gene Location: 728098-730128 bp Ori: QGA05622.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 728506-728950 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 72 8506-72 8950 bp Feature: gene Location: 730804-732190 bp Feature: domain Description: EAL Location: 731449-731719 bp Feature: domain Description: EAL Location: 731449-731719 bp Feature: gene Location: 732286-732387 bp Feature: gene Location: 2173979-2174161 bp Feature: gene Location: 2174226-2174477 bp Feature: gene Location: 2174477-2175961 bp Ori: QGA02754.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2174879-2175569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 174879-2 175569 bp Feature: gene Location: 2176040-2176459 bp Ori: QGA02755.1 Gene: umuD Feature: domain Description: PRK10276 Location: 2176043-2176454 bp Feature: domain Description: PRK102 76 Location: 2 176043-2 176454 bp Feature: gene Location: 2176461-2177726 bp Ori: QGA02756.1 Gene: umuC Feature: domain Description: umuC Location: 2176464-2177724 bp Feature: domain Description: umuC Location: 2 176464-2 17772 4 bp Feature: gene Location: 2819868-2821133 bp Ori: QGA03350.1 Gene: umuC Feature: domain Description: umuC Location: 2819871-2821131 bp Feature: domain Description: umuC Location: 2 819871-2 82 1131 bp Feature: gene Location: 2821135-2821554 bp Ori: QGA03351.1 Gene: umuD Feature: domain Description: PRK10276 Location: 2821138-2821549 bp Feature: domain Description: PRK102 76 Location: 2 82 1138-2 82 1549 bp Feature: gene Location: 2821634-2823118 bp Ori: QGA03352.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2822036-2822726 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 82 2 036-2 82 2 72 6 bp Feature: gene Location: 2823118-2823369 bp Feature: gene Location: 2823914-2824003 bp Feature: gene Location: 3184259-3184678 bp Ori: QGA03690.1 Gene: umuD Feature: domain Description: PRK10276 Location: 3184262-3184673 bp Feature: domain Description: PRK102 76 Location: 31842 62 -3184673 bp Feature: gene Location: 3184656-3184841 bp Feature: gene Location: 3184757-3186241 bp Ori: QGA03692.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3185159-3185849 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3185159-3185849 bp Feature: gene Location: 3186241-3186492 bp Feature: gene Location: 3186858-3187100 bp Ori: QGA03694.1 Feature: domain Description: DinI Location: 3186909-3187089 bp Feature: domain Description: DinI Location: 3186909-3187089 bp Feature: gene Location: 3539426-3539656 bp Feature: gene Location: 3539731-3539916 bp Feature: gene Location: 3539992-3541476 bp Ori: QGA04014.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3540394-3541084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3540394-3541084 bp Feature: gene Location: 3541476-3541727 bp Feature: gene Location: 3541940-3544322 bp Feature: domain Description: Phage_GPA Location: 3542504-3543467 bp Feature: domain Description: Phage_GPA Location: 3542 504-3543467 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, EAL (smart00052), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), DinI (pfam06183), Phage_GPA (pfam05840)