myRT

myRT report for GCA_009648915.1_ASM964891v1

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Seq: CP045769.1 Enterobacter cancerogenus strain MiY-F chromosome, complete genome (4893729 bp)
Overview 1 RT 1: 1136830-1143250 bp 2 RT 2: 3452318-3456809 bp Neighborhood of RT #1 [1136830, 1143435] AAA_23 Smc RVT-Retrons COG3950 TIGR02646 Neighborhood of RT #2 [3452318, 3456838] PRK09692 RVT-Retrons Psu PRK09678 Feature: gene Location: 1136830-1137315 bp Feature: gene Location: 1137318-1139144 bp Ori: QGG08126.1 Feature: domain Description: AAA_23 Location: 1137372-1138107 bp Feature: domain Description: AAA_23 Location: 1 1 37372-1 1 381 07 bp Feature: domain Description: Smc Location: 1138356-1138644 bp Feature: domain Description: Smc Location: 1 1 38356-1 1 38644 bp Feature: gene Location: 1140198-1141133 bp Ori: QGG08127.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1140300-1140900 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 40300-1 1 40900 bp Feature: gene Location: 1141130-1142782 bp Ori: QGG08128.1 Feature: domain Description: COG3950 Location: 1141328-1142744 bp Feature: domain Description: COG3950 Location: 1 1 41 328-1 1 42744 bp Feature: gene Location: 1142785-1143435 bp Ori: QGG08129.1 Feature: domain Description: TIGR02646 Location: 1142851-1143250 bp Feature: domain Description: TIGR02646 Location: 1 1 42851 -1 1 43250 bp Feature: gene Location: 3452318-3453493 bp Ori: QGG10172.1 Feature: domain Description: PRK09692 Location: 3452327-3453488 bp Feature: domain Description: PRK09692 Location: 3452327-3453488 bp Feature: gene Location: 3453611-3454339 bp Feature: gene Location: 3454340-3455824 bp Ori: QGG10174.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3455048-3455603 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3455048-3455603 bp Feature: gene Location: 3456028-3456591 bp Ori: QGG10175.1 Feature: domain Description: Psu Location: 3456046-3456583 bp Feature: domain Description: Psu Location: 3456046-3456583 bp Feature: gene Location: 3456620-3456838 bp Ori: QGG10176.1 Feature: domain Description: PRK09678 Location: 3456623-3456809 bp Feature: domain Description: PRK09678 Location: 3456623-3456809 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_23 (pfam13476), Smc (COG1196), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein), PRK09692 (Integrase; provisional), Psu (pfam07455), PRK09678 (DNA-binding transcriptional regulator; Provisional)