myRT

myRT report for GCA_009660185.1_ASM966018v1

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Seq: CP045913.1 Serratia proteamaculans strain 336X chromosome, complete genome (5593263 bp)
Overview 1 RT 1: 743826-749266 bp 2 RT 2: 2293821-2298149 bp Neighborhood of RT #1 [743826, 749268] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C DDE_Tnp_IS66_C RVT-UG4 PRK15260 PRK15287 Neighborhood of RT #2 [2293821, 2298178] IstB_IS21_ATP IstB_IS21 COG4584 COG4584 RVT-GII GIIM HTH_23 InsE TnpB_IS66 Feature: gene Location: 743826-745460 bp Ori: QGH59987.1 Feature: domain Description: LZ_Tnp_IS66 Location: 743985-744255 bp Feature: domain Description: LZ_Tnp_IS66 Location: 743985-744255 bp Feature: domain Description: zf-IS66 Location: 744279-744408 bp Feature: domain Description: zf-IS66 Location: 744279-744408 bp Feature: domain Description: DDE_Tnp_IS66 Location: 744453-745308 bp Feature: domain Description: DDE_Tnp_IS66 Location: 744453-745308 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 745329-745440 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 745329-745440 bp Feature: gene Location: 745672-745848 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 745717-745828 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 74571 7-745828 bp Feature: gene Location: 747280-748257 bp Ori: QGH59988.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 747625-748066 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 747625-748066 bp Feature: gene Location: 748250-748777 bp Ori: QGH59989.1 Feature: domain Description: PRK15260 Location: 748295-748772 bp Feature: domain Description: PRK1 5260 Location: 748295-748772 bp Feature: gene Location: 748792-749268 bp Ori: QGH59990.1 Feature: domain Description: PRK15287 Location: 748816-749266 bp Feature: domain Description: PRK1 5287 Location: 74881 6-749266 bp Feature: gene Location: 2293821-2294558 bp Ori: QGH61364.1 Feature: domain Description: IstB_IS21_ATP Location: 2293893-2293977 bp Feature: domain Description: IstB_IS21 _ATP Location: 2293893-2293977 bp Feature: domain Description: IstB_IS21 Location: 2293980-2294508 bp Feature: domain Description: IstB_IS21 Location: 2293980-2294508 bp Feature: gene Location: 2294575-2296119 bp Ori: QGH61365.1 Feature: domain Description: COG4584 Location: 2294680-2295454 bp Feature: domain Description: COG4584 Location: 2294680-2295454 bp Feature: domain Description: COG4584 Location: 2295514-2295967 bp Feature: domain Description: COG4584 Location: 229551 4-2295967 bp Feature: gene Location: 2296308-2297150 bp Ori: QGH64314.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2296335-2296791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2296335-2296791 bp Feature: domain Description: GIIM Note: maturase Location: 2296869-2297106 bp Feature: domain Description: GIIM Note: maturase Location: 2296869-22971 06 bp Feature: gene Location: 2297163-2297834 bp Ori: QGH64315.1 Feature: domain Description: HTH_23 Location: 2297217-2297325 bp Feature: domain Description: HTH_23 Location: 229721 7-2297325 bp Feature: domain Description: InsE Location: 2297442-2297814 bp Feature: domain Description: InsE Location: 2297442-229781 4 bp Feature: gene Location: 2297831-2298178 bp Ori: QGH61366.1 Gene: tnpB Feature: domain Description: TnpB_IS66 Location: 2297858-2298149 bp Feature: domain Description: TnpB_IS66 Location: 2297858-22981 49 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-UG4, PRK15260 (fimbrial protein SteF; Provisional), PRK15287 (fimbrial minor subunit StfF), IstB_IS21_ATP (pfam08483), IstB_IS21 (pfam01695), COG4584 (Transposase )
RVT-GII, GIIM (pfam08388), HTH_23 (pfam13384), InsE (COG2963), TnpB_IS66 (pfam05717)