myRT

myRT report for GCA_009662135.1_ASM966213v1

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Seq: CP045785.1 Shigella dysenteriae strain CFSAN029786 plasmid p1CFSAN029786, complete sequence (223637 bp)
Overview 1 RT 1: 64540-68112 bp 2 RT 2: 158303-161197 bp 3 RT 3: 176527-179329 bp Neighborhood of RT #1 [64540, 68123] DDE_Tnp_IS66 RVT-GII GIIM DDE_Tnp_IS66_C COG3547 Neighborhood of RT #2 [158303, 161197] InsA Tra5 RVT-GII InsE Neighborhood of RT #3 [176527, 179578] InsE RVT-GII Y2_Tnp Feature: gene Location: 64540-65429 bp Feature: gene Location: 65466-65645 bp Feature: domain Description: DDE_Tnp_IS66 Location: 65472-65628 bp Feature: domain Description: DDE_Tnp_IS66 Location: 65472-65628 bp Feature: gene Location: 66171-67349 bp Ori: QGH88212.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66318-66972 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6631 8-66972 bp Feature: domain Description: GIIM Note: maturase Location: 67050-67272 bp Feature: domain Description: GIIM Note: maturase Location: 67050-67272 bp Feature: gene Location: 67432-67611 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 67477-67588 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 67477-67588 bp Feature: gene Location: 67641-68123 bp Feature: domain Description: COG3547 Location: 67659-68112 bp Feature: domain Description: COG3547 Location: 67659-681 1 2 bp Feature: gene Location: 158303-159000 bp Feature: domain Description: InsA Location: 158309-158576 bp Feature: domain Description: InsA Location: 1 58309-1 58576 bp Feature: gene Location: 159065-159298 bp Feature: domain Description: Tra5 Location: 159089-159281 bp Feature: domain Description: Tra5 Location: 1 59089-1 59281 bp Feature: gene Location: 159311-159928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 159611-159929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5961 1 -1 59929 bp Feature: gene Location: 159984-160308 bp Ori: QGH88156.1 Feature: domain Description: InsE Location: 159987-160308 bp Feature: domain Description: InsE Location: 1 59987-1 60308 bp Feature: gene Location: 160308-161197 bp Feature: gene Location: 176527-177214 bp Feature: domain Description: InsE Location: 176530-176773 bp Feature: domain Description: InsE Location: 1 76530-1 76773 bp Feature: gene Location: 177216-177582 bp Feature: gene Location: 177777-178016 bp Ori: QGH88166.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 177783-177990 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 77783-1 77990 bp Feature: gene Location: 178820-179101 bp Feature: gene Location: 179149-179578 bp Feature: domain Description: Y2_Tnp Location: 179158-179329 bp Feature: domain Description: Y2_Tnp Location: 1 791 58-1 79329 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), COG3547 (Transposase ), InsA (COG3677), Tra5 (COG2801), InsE (COG2963), Y2_Tnp (pfam04986)