myRT

myRT report for GCA_009664635.1_ASM966463v1

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Seq: CP045952.1 Salmonella enterica subsp. enterica serovar Typhimurium strain AUSMDU00008979 chromosome, complete genome (5022086 bp)
Overview 1 RT 1: 695758-702472 bp 2 RT 2: 5010919-5017216 bp Neighborhood of RT #1 [695758, 702474] RVT-UG11 PRK10201 PRK05658 Neighborhood of RT #2 [5010919, 5017278] PRK10216 PRK10473 RVT-Retrons PRK09692 Feature: gene Location: 695758-696303 bp Feature: gene Location: 696306-698002 bp Feature: gene Location: 698909-699673 bp Ori: QGK33943.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 699032-699485 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 699032-699485 bp Feature: gene Location: 699997-700503 bp Ori: QGK33944.1 Feature: domain Description: PRK10201 Location: 700000-700498 bp Feature: domain Description: PRK1 0201 Location: 700000-700498 bp Feature: gene Location: 700627-702474 bp Ori: QGK33945.1 Gene: rpoD Feature: domain Description: PRK05658 Location: 700633-702472 bp Feature: domain Description: PRK05658 Location: 700633-702472 bp Feature: gene Location: 5010919-5011878 bp Ori: QGK37725.1 Gene: yidZ Feature: domain Description: PRK10216 Location: 5010922-5011873 bp Feature: domain Description: PRK1 021 6 Location: 501 0922-501 1 873 bp Feature: gene Location: 5011847-5013034 bp Ori: QGK37726.1 Feature: domain Description: PRK10473 Location: 5011850-5013026 bp Feature: domain Description: PRK1 0473 Location: 501 1 850-501 3026 bp Feature: gene Location: 5013836-5014705 bp Ori: QGK37909.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5013881-5014466 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 501 3881 -501 4466 bp Feature: gene Location: 5014771-5015733 bp Feature: gene Location: 5016058-5017278 bp Feature: domain Description: PRK09692 Location: 5016067-5017216 bp Feature: domain Description: PRK09692 Location: 501 6067-501 721 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase), PRK05658 (RNA polymerase sigma factor RpoD; Validated), PRK10216 (HTH-type transcriptional regulator YidZ), PRK10473 (MdtL family multidrug efflux MFS transporter), RVT-Retrons, PRK09692 (Integrase; provisional)