myRT

myRT report for GCA_009665235.1_ASM966523v1

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Seq: CP035684.1 Vibrio metschnikovii strain 2012V-1020 chromosome 1, complete sequence (2972130 bp)
Overview 1 RT 1: 67168-70479 bp 2 RT 2: 2264374-2268755 bp Neighborhood of RT #1 [67168, 70490] PRK11146 lolE_release RVT-DGRs Avd_like Neighborhood of RT #2 [2264374, 2268772] RVT_N RVT-GII GIIM HNHc SapB EFP_modif_epmB Feature: gene Location: 67168-67674 bp Feature: domain Description: PRK11146 Location: 67180-67657 bp Feature: domain Description: PRK1 1 1 46 Location: 671 80-67657 bp Feature: gene Location: 67731-68411 bp Feature: domain Description: lolE_release Location: 67737-68409 bp Feature: domain Description: lolE_release Location: 67737-68409 bp Feature: gene Location: 68842-69882 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 69034-69658 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 69034-69658 bp Feature: gene Location: 69981-70130 bp Feature: gene Location: 70152-70490 bp Feature: domain Description: Avd_like Location: 70173-70479 bp Feature: domain Description: Avd_like Location: 701 73-70479 bp Feature: gene Location: 2264374-2264568 bp Feature: gene Location: 2264993-2265121 bp Feature: gene Location: 2265211-2266815 bp Feature: domain Description: RVT_N Location: 2265262-2265505 bp Feature: domain Description: RVT_N Location: 2265262-2265505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2265550-2266195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2265550-22661 95 bp Feature: domain Description: GIIM Note: maturase Location: 2266249-2266480 bp Feature: domain Description: GIIM Note: maturase Location: 2266249-2266480 bp Feature: domain Description: HNHc Note: nucleases Location: 2266708-2266807 bp Feature: domain Description: HNHc Note: nucleases Location: 2266708-2266807 bp Feature: gene Location: 2267099-2267569 bp Feature: domain Description: SapB Location: 2267153-2267540 bp Feature: domain Description: SapB Location: 22671 53-2267540 bp Feature: gene Location: 2267750-2268772 bp Feature: domain Description: EFP_modif_epmB Location: 2267798-2268755 bp Feature: domain Description: EFP_modif_epmB Location: 2267798-2268755 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11146 (lipoprotein-releasing ABC transporter permease subunit LolE), lolE_release (TIGR02213), RVT-DGRs, Avd_like (cd16376), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), SapB (smart00741), EFP_modif_epmB (TIGR03821)