myRT

myRT report for GCA_009667765.1_ASM966776v1

Download annotations/find similar RTs

Seq: CP043664.1 Salmonella enterica subsp. enterica serovar Kentucky strain 161365 chromosome, complete genome (4889798 bp)
Overview 1 RT 1: 707008-713178 bp 2 RT 2: 1184422-1187484 bp Neighborhood of RT #1 [707008, 713180] 5 RVT-UG11 PRK10201 PRK05658 Neighborhood of RT #2 [1184422, 1187484] TIR-like RVT-Retrons InsE Feature: gene Location: 707008-708708 bp Ori: QGK99513.1 Feature: domain Description: 5 Location: 708232-708526 bp Feature: domain Description: 5 Location: 708232-708526 bp Feature: gene Location: 709460-709645 bp Feature: gene Location: 709615-710379 bp Ori: QGK95756.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 709738-710191 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 709738-71 01 91 bp Feature: gene Location: 710703-711209 bp Ori: QGK95757.1 Feature: domain Description: PRK10201 Location: 710706-711204 bp Feature: domain Description: PRK1 0201 Location: 71 0706-71 1 204 bp Feature: gene Location: 711333-713180 bp Ori: QGK95758.1 Gene: rpoD Feature: domain Description: PRK05658 Location: 711339-713178 bp Feature: domain Description: PRK05658 Location: 71 1 339-71 31 78 bp Feature: gene Location: 1184422-1184631 bp Feature: gene Location: 1184697-1185536 bp Ori: QGK96195.1 Feature: domain Description: TIR-like Location: 1185102-1185456 bp Feature: domain Description: TIR-like Location: 1 1 851 02-1 1 85456 bp Feature: gene Location: 1185586-1186545 bp Ori: QGK96196.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1185766-1186288 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 85766-1 1 86288 bp Feature: gene Location: 1186576-1186803 bp Feature: gene Location: 1187235-1187484 bp Ori: QGK96198.1 Feature: domain Description: InsE Location: 1187244-1187484 bp Feature: domain Description: InsE Location: 1 1 87244-1 1 87484 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 5 (PHA02596), PRK10201 (G/U mismatch-specific DNA glycosylase), PRK05658 (RNA polymerase sigma factor RpoD; Validated), TIR-like (pfam10137), InsE (COG2963)