myRT

myRT report for GCA_009667835.1_ASM966783v1

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Seq: CP043667.1 Salmonella enterica subsp. enterica serovar Kentucky strain 162835 chromosome, complete genome (4851336 bp)
Overview 1 RT 1: 710161-716331 bp 2 RT 2: 1187575-1190637 bp Neighborhood of RT #1 [710161, 716333] 5 RVT-UG11 PRK10201 PRK05658 Neighborhood of RT #2 [1187575, 1190637] TIR-like RVT-Retrons InsE Feature: gene Location: 710161-711861 bp Ori: QGK94944.1 Feature: domain Description: 5 Location: 711385-711679 bp Feature: domain Description: 5 Location: 71 1 385-71 1 679 bp Feature: gene Location: 712613-712798 bp Feature: gene Location: 712768-713532 bp Ori: QGK91234.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 712891-713344 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 71 2891 -71 3344 bp Feature: gene Location: 713856-714362 bp Ori: QGK91235.1 Feature: domain Description: PRK10201 Location: 713859-714357 bp Feature: domain Description: PRK1 0201 Location: 71 3859-71 4357 bp Feature: gene Location: 714486-716333 bp Ori: QGK91236.1 Gene: rpoD Feature: domain Description: PRK05658 Location: 714492-716331 bp Feature: domain Description: PRK05658 Location: 71 4492-71 6331 bp Feature: gene Location: 1187575-1187784 bp Feature: gene Location: 1187850-1188689 bp Ori: QGK91673.1 Feature: domain Description: TIR-like Location: 1188255-1188609 bp Feature: domain Description: TIR-like Location: 1 1 88255-1 1 88609 bp Feature: gene Location: 1188739-1189698 bp Ori: QGK91674.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1188919-1189441 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 8891 9-1 1 89441 bp Feature: gene Location: 1189729-1189956 bp Feature: gene Location: 1190388-1190637 bp Ori: QGK91676.1 Feature: domain Description: InsE Location: 1190397-1190637 bp Feature: domain Description: InsE Location: 1 1 90397-1 1 90637 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 5 (PHA02596), RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase), PRK05658 (RNA polymerase sigma factor RpoD; Validated), TIR-like (pfam10137), RVT-Retrons, InsE (COG2963)