myRT

myRT report for GCA_009671045.1_ASM967104v1

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Seq: CP046000.1 Escherichia coli strain 1916D18 chromosome, complete genome (4828364 bp)
Overview 1 RT 1: 1115522-1124323 bp 2 RT 2: 4039833-4044881 bp Neighborhood of RT #1 [1115522, 1124323] mutS1 INT_Rci_Hp1_C INT_P4_C RVT-UG3 RVT-UG8 InsE Neighborhood of RT #2 [4039833, 4044892] prfC PRK10597 RVT-Retrons TIR_2 Caudo_TAP Feature: gene Location: 1115522-1118089 bp Ori: QGL23922.1 Gene: mutS Feature: domain Description: mutS1 Location: 1115558-1118078 bp Feature: domain Description: mutS1 Location: 1 1 1 5558-1 1 1 8078 bp Feature: gene Location: 1118249-1119709 bp Ori: QGL20700.1 Feature: domain Description: INT_Rci_Hp1_C Location: 1118624-1118831 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 1 1 1 8624-1 1 1 8831 bp Feature: domain Description: INT_P4_C Location: 1119050-1119587 bp Feature: domain Description: INT_P4_C Location: 1 1 1 9050-1 1 1 9587 bp Feature: gene Location: 1119706-1120968 bp Ori: QGL20701.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1119988-1120483 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1 1 1 9988-1 1 20483 bp Feature: gene Location: 1120965-1122983 bp Ori: QGL20702.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1121535-1121985 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 1 21 535-1 1 21 985 bp Feature: gene Location: 1124323-1124584 bp Ori: QGL20703.1 Feature: domain Description: InsE Location: 1124350-1124584 bp Feature: domain Description: InsE Location: 1 1 24350-1 1 24584 bp Feature: gene Location: 1123422-1124323 bp Feature: gene Location: 4039833-4041419 bp Ori: QGL23206.1 Gene: prfC Feature: domain Description: prfC Location: 4039851-4041417 bp Feature: domain Description: prfC Location: 4039851 -4041 41 7 bp Feature: gene Location: 4041639-4041899 bp Ori: QGL23207.1 Feature: domain Description: PRK10597 Location: 4041642-4041882 bp Feature: domain Description: PRK1 0597 Location: 4041 642-4041 882 bp Feature: gene Location: 4042259-4043863 bp Ori: QGL24044.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4042550-4043141 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4042550-40431 41 bp Feature: domain Description: TIR_2 Location: 4043468-4043756 bp Feature: domain Description: TIR_2 Location: 4043468-4043756 bp Feature: gene Location: 4044047-4044321 bp Feature: gene Location: 4044308-4044892 bp Ori: QGL23208.1 Feature: domain Description: Caudo_TAP Location: 4044524-4044881 bp Feature: domain Description: Caudo_TAP Location: 4044524-4044881 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT mutS1 (TIGR01070), INT_Rci_Hp1_C (cd00796), INT_P4_C (cd00801), RVT-UG3, RVT-UG8, InsE (COG2963), prfC (TIGR00503), PRK10597 (DNA damage-inducible protein I; Provisional), RVT-Retrons, TIR_2 (pfam13676)
Caudo_TAP (pfam02413)