myRT

myRT report for GCA_009676605.1_ASM967660v1

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Seq: CP040440.1 Stenotrophomonas maltophilia strain ICU331 chromosome, complete genome (4995994 bp)
Overview 1 RT 1: 3777431-3780827 bp 2 RT 2: 3906577-3916177 bp 3 RT 3: 4518864-4526646 bp Neighborhood of RT #1 [3777431, 3780827] DUF1566 Avd_like RVT-DGRs Neighborhood of RT #2 [3906577, 3916179] DUF805 RVT_N RVT-GII GIIM HNHc RVT_N RVT-GII GIIM HNHc Triacylglycerol_lipase_like YhjY PRK05659 Neighborhood of RT #3 [4518864, 4527932] YhcG RadC RVT-UG8 RVT-UG3 DUF932 Spo0J Feature: gene Location: 3777431-3777856 bp Ori: QGM11082.1 Feature: domain Description: DUF1566 Location: 3777584-3777842 bp Feature: domain Description: DUF1 566 Location: 3777584-3777842 bp Feature: gene Location: 3777883-3778326 bp Ori: QGM11083.1 Feature: domain Description: Avd_like Location: 3777913-3778225 bp Feature: domain Description: Avd_like Location: 377791 3-3778225 bp Feature: gene Location: 3778323-3779690 bp Ori: QGM11084.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3778683-3779382 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3778683-3779382 bp Feature: gene Location: 3779687-3780577 bp Feature: gene Location: 3780570-3780827 bp Feature: gene Location: 3906577-3907731 bp Feature: gene Location: 3907806-3908210 bp Ori: QGM11214.1 Feature: domain Description: DUF805 Location: 3907839-3908193 bp Feature: domain Description: DUF805 Location: 3907839-39081 93 bp Feature: gene Location: 3908637-3910289 bp Ori: QGM11215.1 Gene: ltrA Feature: domain Description: RVT_N Location: 3908688-3908931 bp Feature: domain Description: RVT_N Location: 3908688-3908931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3908976-3909597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3908976-3909597 bp Feature: domain Description: GIIM Note: maturase Location: 3909651-3909882 bp Feature: domain Description: GIIM Note: maturase Location: 3909651 -3909882 bp Feature: domain Description: HNHc Note: nucleases Location: 3910083-3910236 bp Feature: domain Description: HNHc Note: nucleases Location: 391 0083-391 0236 bp Feature: gene Location: 3911251-3912903 bp Ori: QGM11216.1 Gene: ltrA Feature: domain Description: RVT_N Location: 3911302-3911545 bp Feature: domain Description: RVT_N Location: 391 1 302-391 1 545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3911590-3912211 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 391 1 590-391 221 1 bp Feature: domain Description: GIIM Note: maturase Location: 3912265-3912496 bp Feature: domain Description: GIIM Note: maturase Location: 391 2265-391 2496 bp Feature: domain Description: HNHc Note: nucleases Location: 3912697-3912850 bp Feature: domain Description: HNHc Note: nucleases Location: 391 2697-391 2850 bp Feature: gene Location: 3913937-3915772 bp Ori: QGM11217.1 Feature: domain Description: Triacylglycerol_lipase_like Location: 3914027-3914852 bp Feature: domain Description: Triacylglycerol_lipase_like Location: 391 4027-391 4852 bp Feature: domain Description: YhjY Location: 3915044-3915758 bp Feature: domain Description: YhjY Location: 391 5044-391 5758 bp Feature: gene Location: 3915979-3916179 bp Ori: QGM11218.1 Gene: thiS Feature: domain Description: PRK05659 Location: 3915982-3916177 bp Feature: domain Description: PRK05659 Location: 391 5982-391 61 77 bp Feature: gene Location: 4518864-4520030 bp Ori: QGM11731.1 Feature: domain Description: YhcG Location: 4519302-4519779 bp Feature: domain Description: YhcG Location: 451 9302-451 9779 bp Feature: gene Location: 4520366-4520875 bp Ori: QGM11732.1 Gene: radC Feature: domain Description: RadC Location: 4520417-4520873 bp Feature: domain Description: RadC Location: 452041 7-4520873 bp Feature: gene Location: 4521120-4523075 bp Ori: QGM11733.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 4521642-4522083 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 4521 642-4522083 bp Feature: gene Location: 4523085-4524368 bp Ori: QGM11734.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 4523388-4523886 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 4523388-4523886 bp Feature: gene Location: 4524980-4525807 bp Ori: QGM11735.1 Feature: domain Description: DUF932 Location: 4525091-4525772 bp Feature: domain Description: DUF932 Location: 4525091 -4525772 bp Feature: gene Location: 4525887-4527932 bp Ori: QGM11736.1 Feature: domain Description: Spo0J Location: 4525953-4526646 bp Feature: domain Description: Spo0J Location: 4525953-4526646 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs, DUF805 (pfam05656), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), Triacylglycerol_lipase_like (cd01847), YhjY (COG5571)
PRK05659 (sulfur carrier protein ThiS; Validated), YhcG (COG4804), RadC (pfam04002), RVT-UG8, RVT-UG3, DUF932 (pfam06067), Spo0J (COG1475)