myRT

myRT report for GCA_009676955.1_ASM967695v1

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Seq: CP045696.1 Muribaculaceae bacterium DSM 108610 strain Oil-RF-744-WCA-WT-10 chromosome, complete genome (3340670 bp)
Overview 1 RT 1: 352916-358082 bp 2 RT 2: 1910080-1916030 bp 3 RT 3: 2646950-2652261 bp Neighborhood of RT #1 [352916, 358099] PRK11331 HTH_XRE RVT-GII INTN1_C_like Neighborhood of RT #2 [1910080, 1916410] WYL WG_beta_rep WG_beta_rep RVT-Retrons LRR_3 LRR_3 LRR_5 LRR_3 LRR_3 Neighborhood of RT #3 [2646950, 2652261] ruvC RVT-GII GIIM Feature: gene Location: 352916-354364 bp Feature: domain Description: PRK11331 Location: 353588-354086 bp Feature: domain Description: PRK1 1 331 Location: 353588-354086 bp Feature: gene Location: 354370-354861 bp Feature: domain Description: HTH_XRE Location: 354394-354565 bp Feature: domain Description: HTH_XRE Location: 354394-354565 bp Feature: gene Location: 355084-355944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 355417-355858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35541 7-355858 bp Feature: gene Location: 356728-357192 bp Feature: gene Location: 357242-358099 bp Feature: domain Description: INTN1_C_like Location: 357560-358082 bp Feature: domain Description: INTN1 _C_like Location: 357560-358082 bp Feature: gene Location: 1910080-1911195 bp Feature: domain Description: WYL Location: 1910629-1911178 bp Feature: domain Description: WYL Location: 1 91 0629-1 91 1 1 78 bp Feature: gene Location: 1911255-1911698 bp Feature: domain Description: WG_beta_rep Location: 1911336-1911423 bp Feature: domain Description: WG_beta_rep Location: 1 91 1 336-1 91 1 423 bp Feature: domain Description: WG_beta_rep Location: 1911525-1911570 bp Feature: domain Description: WG_beta_rep Location: 1 91 1 525-1 91 1 570 bp Feature: gene Location: 1912009-1913643 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1912192-1912801 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 91 21 92-1 91 2801 bp Feature: gene Location: 1913645-1914490 bp Feature: gene Location: 1914758-1916410 bp Feature: domain Description: LRR_3 Location: 1914800-1915016 bp Feature: domain Description: LRR_3 Location: 1 91 4800-1 91 501 6 bp Feature: domain Description: LRR_3 Location: 1915028-1915283 bp Feature: domain Description: LRR_3 Location: 1 91 5028-1 91 5283 bp Feature: domain Description: LRR_5 Location: 1915307-1915499 bp Feature: domain Description: LRR_5 Location: 1 91 5307-1 91 5499 bp Feature: domain Description: LRR_3 Location: 1915568-1915736 bp Feature: domain Description: LRR_3 Location: 1 91 5568-1 91 5736 bp Feature: domain Description: LRR_3 Location: 1915856-1916030 bp Feature: domain Description: LRR_3 Location: 1 91 5856-1 91 6030 bp Feature: gene Location: 2646950-2647516 bp Feature: domain Description: ruvC Location: 2646971-2647445 bp Feature: domain Description: ruvC Location: 2646971 -2647445 bp Feature: gene Location: 2647530-2648819 bp Feature: gene Location: 2649334-2650296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2649667-2650285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2649667-2650285 bp Feature: gene Location: 2650312-2650731 bp Feature: domain Description: GIIM Note: maturase Location: 2650339-2650570 bp Feature: domain Description: GIIM Note: maturase Location: 2650339-2650570 bp Feature: gene Location: 2650885-2652261 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11331 (5-methylcytosine-specific restriction enzyme subunit McrB; Provisional), HTH_XRE (smart00530), RVT-GII, INTN1_C_like (cd01185), WYL (pfam13280), WG_beta_rep (pfam14903), RVT-Retrons, LRR_3 (sd00036), LRR_5 (pfam13306), ruvC (TIGR00228)
GIIM (pfam08388)