myRT

myRT report for GCA_009688965.1_ASM968896v1

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Seq: AP021875.1 Desulfosarcina widdelii PP31 DNA, complete genome (7297718 bp)
Overview 1 RT 1: 65534-69820 bp 2 RT 2: 510356-516606 bp 3 RT 3: 1724948-1729443 bp 4 RT 4: 5987677-5996513 bp Neighborhood of RT #1 [65534, 69820] COG3666 DDE_Tnp_1 RVT-GII DDE_Tnp_1 AHL_lactonase_MBL-fold Neighborhood of RT #2 [510356, 516692] outer_NodT outer_NodT RVT-GII xerC Neighborhood of RT #3 [1724948, 1729443] VOC_like RVT-GII Neighborhood of RT #4 [5987677, 5996539] AcyC FHA FN3 tand_rpt_95 REJ RVT-GII GIIM thiolase AcylCoA_DH_N ACAD_fadE5 Acyl-CoA_dh_C Feature: gene Location: 65534-66328 bp Ori: BBO72646.1 Feature: domain Description: COG3666 Location: 65564-65930 bp Feature: domain Description: COG3666 Location: 65564-65930 bp Feature: domain Description: DDE_Tnp_1 Location: 66047-66278 bp Feature: domain Description: DDE_Tnp_1 Location: 66047-66278 bp Feature: gene Location: 66689-67057 bp Feature: gene Location: 67295-68455 bp Ori: BBO72648.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67583-68063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67583-68063 bp Feature: domain Description: DDE_Tnp_1 Location: 68090-68291 bp Feature: domain Description: DDE_Tnp_1 Location: 68090-68291 bp Feature: gene Location: 68523-69266 bp Ori: BBO72649.1 Feature: domain Description: AHL_lactonase_MBL-fold Location: 68538-69237 bp Feature: domain Description: AHL_lactonase_MBL-fold Location: 68538-69237 bp Feature: gene Location: 69464-69820 bp Feature: gene Location: 510356-511846 bp Ori: BBO73074.1 Feature: domain Description: outer_NodT Location: 510398-510740 bp Feature: domain Description: outer_NodT Location: 51 0398-51 0740 bp Feature: domain Description: outer_NodT Location: 510824-511835 bp Feature: domain Description: outer_NodT Location: 51 0824-51 1 835 bp Feature: gene Location: 512658-513248 bp Feature: gene Location: 513825-515321 bp Ori: BBO73076.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 514281-514947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 4281 -51 4947 bp Feature: gene Location: 515588-515788 bp Feature: gene Location: 515994-516692 bp Ori: BBO73078.1 Feature: domain Description: xerC Location: 516060-516606 bp Feature: domain Description: xerC Location: 51 6060-51 6606 bp Feature: gene Location: 1724948-1725130 bp Ori: BBO74209.1 Feature: domain Description: VOC_like Location: 1724954-1725083 bp Feature: domain Description: VOC_like Location: 1 724954-1 725083 bp Feature: gene Location: 1725597-1726283 bp Feature: gene Location: 1726437-1727933 bp Ori: BBO74211.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1726893-1727559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 726893-1 727559 bp Feature: gene Location: 1728496-1728942 bp Feature: gene Location: 1729195-1729443 bp Feature: gene Location: 5987677-5988582 bp Ori: BBO78131.1 Feature: domain Description: AcyC Location: 5987698-5988190 bp Feature: domain Description: AcyC Location: 5987698-59881 90 bp Feature: domain Description: FHA Location: 5988328-5988469 bp Feature: domain Description: FHA Location: 5988328-5988469 bp Feature: gene Location: 5989110-5991335 bp Ori: BBO78132.1 Feature: domain Description: FN3 Location: 5989230-5989458 bp Feature: domain Description: FN3 Location: 5989230-5989458 bp Feature: domain Description: tand_rpt_95 Location: 5990199-5990469 bp Feature: domain Description: tand_rpt_95 Location: 59901 99-5990469 bp Feature: domain Description: REJ Location: 5990655-5991213 bp Feature: domain Description: REJ Location: 5990655-5991 21 3 bp Feature: gene Location: 5991812-5993212 bp Ori: BBO78133.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5992148-5992766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59921 48-5992766 bp Feature: domain Description: GIIM Note: maturase Location: 5992814-5993039 bp Feature: domain Description: GIIM Note: maturase Location: 599281 4-5993039 bp Feature: gene Location: 5993318-5994568 bp Ori: BBO78134.1 Gene: thlA Feature: domain Description: thiolase Location: 5993333-5994560 bp Feature: domain Description: thiolase Location: 5993333-5994560 bp Feature: gene Location: 5994683-5996539 bp Ori: BBO78135.1 Feature: domain Description: AcylCoA_DH_N Location: 5994692-5994785 bp Feature: domain Description: AcylCoA_DH_N Location: 5994692-5994785 bp Feature: domain Description: ACAD_fadE5 Location: 5994818-5996057 bp Feature: domain Description: ACAD_fadE5 Location: 599481 8-5996057 bp Feature: domain Description: Acyl-CoA_dh_C Location: 5996090-5996513 bp Feature: domain Description: Acyl-CoA_dh_C Location: 5996090-599651 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3666 (Transposase ), DDE_Tnp_1 (pfam01609), RVT-GII, AHL_lactonase_MBL-fold (cd07729), outer_NodT (TIGR01845), xerC (PRK01287), VOC_like (cd16355), AcyC (COG2114), FHA (smart00240), FN3 (smart00060)
tand_rpt_95 (NF012211), REJ (pfam02010), GIIM (pfam08388), thiolase (PRK06158), AcylCoA_DH_N (pfam12418), ACAD_fadE5 (cd01153), Acyl-CoA_dh_C (pfam12806)