myRT

myRT report for GCA_009697265.1_ASM969726v1

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Seq: CP046080.1 Elizabethkingia anophelis strain 296-96 chromosome, complete genome (4203861 bp)
Overview 1 RT 1: 581096-583956 bp 2 RT 2: 627847-637207 bp 3 RT 3: 3298534-3301396 bp 4 RT 4: 3745725-3751243 bp Neighborhood of RT #1 [581096, 583956] RVT-DGRs Neighborhood of RT #2 [627847, 637248] dnaG Toprim_2 Eco57I COG4646 Helicase_C RVT-DGRs Fib_succ_major Avd_like Neighborhood of RT #3 [3298534, 3301396] RVT-DGRs Neighborhood of RT #4 [3745725, 3751704] DUF4133 Bac_Flav_CT_G RVT-GII group_II_RT_mat HNHc Bac_Flav_CT_G DUF4141 Feature: gene Location: 581096-581548 bp Feature: gene Location: 581560-582024 bp Feature: gene Location: 582236-583201 bp Ori: QGN21592.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 582443-583037 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 582443-583037 bp Feature: gene Location: 583180-583476 bp Feature: gene Location: 583489-583956 bp Feature: gene Location: 627847-633669 bp Ori: QGN21635.1 Feature: domain Description: dnaG Location: 628075-628357 bp Feature: domain Description: dnaG Location: 628075-628357 bp Feature: domain Description: Toprim_2 Location: 628519-628807 bp Feature: domain Description: Toprim_2 Location: 62851 9-628807 bp Feature: domain Description: Eco57I Location: 629719-629902 bp Feature: domain Description: Eco57I Location: 62971 9-629902 bp Feature: domain Description: COG4646 Location: 631246-632248 bp Feature: domain Description: COG4646 Location: 631 246-632248 bp Feature: domain Description: Helicase_C Location: 632671-632884 bp Feature: domain Description: Helicase_C Location: 632671 -632884 bp Feature: gene Location: 633904-634845 bp Feature: gene Location: 635339-636553 bp Ori: QGN21637.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 635528-636269 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 635528-636269 bp Feature: gene Location: 636571-636774 bp Feature: domain Description: Fib_succ_major Location: 636577-636745 bp Feature: domain Description: Fib_succ_major Location: 636577-636745 bp Feature: gene Location: 636874-637248 bp Ori: QGN21638.1 Feature: domain Description: Avd_like Location: 636901-637207 bp Feature: domain Description: Avd_like Location: 636901 -637207 bp Feature: gene Location: 3298534-3299001 bp Feature: gene Location: 3299014-3299310 bp Feature: gene Location: 3299289-3300254 bp Ori: QGN23902.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3299496-3300090 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3299496-3300090 bp Feature: gene Location: 3300468-3300932 bp Feature: gene Location: 3300944-3301396 bp Feature: gene Location: 3745725-3746057 bp Ori: QGN24839.1 Feature: domain Description: DUF4133 Location: 3745743-3746010 bp Feature: domain Description: DUF41 33 Location: 3745743-374601 0 bp Feature: gene Location: 3746054-3748117 bp Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 3746057-3748118 bp Feature: domain Description: Bac_Flav_CT_G Location: 3746057-37481 1 8 bp Feature: gene Location: 3748688-3750499 bp Ori: QGN24285.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3748952-3749774 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3748952-3749774 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3749984-3750104 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3749984-37501 04 bp Feature: domain Description: HNHc Note: nucleases Location: 3750317-3750473 bp Feature: domain Description: HNHc Note: nucleases Location: 375031 7-3750473 bp Feature: gene Location: 3750559-3751044 bp Ori: QGN24286.1 Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 3750580-3751018 bp Feature: domain Description: Bac_Flav_CT_G Location: 3750580-3751 01 8 bp Feature: gene Location: 3751072-3751704 bp Ori: QGN24287.1 Feature: domain Description: DUF4141 Location: 3751087-3751243 bp Feature: domain Description: DUF41 41 Location: 3751 087-3751 243 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, dnaG (TIGR01391), Toprim_2 (pfam13155), Eco57I (pfam07669), COG4646 (Adenine-specific DNA methylase, N12 class ), Helicase_C (pfam00271), Fib_succ_major (TIGR02145), Avd_like (cd16376), DUF4133 (pfam13571), Bac_Flav_CT_G (TIGR03783)
RVT-GII, group_II_RT_mat (TIGR04416), HNHc (smart00507), DUF4141 (pfam13605)