myRT

myRT report for GCA_009707345.1_ASM970734v1

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Seq: CP046125.1 Enterococcus casseliflavus strain EC291 plasmid unnamed2, complete sequence (116159 bp)
Overview 1 RT 1: 8520-14218 bp 2 RT 2: 57849-63869 bp 3 RT 3: 96701-103209 bp Neighborhood of RT #1 [8520, 14218] PRK07275 PRK07726 RVT-GII HNHc PRK07726 Neighborhood of RT #2 [57849, 63877] PRK07275 PRK07726 RVT-GII HNHc PRK07726 SR_ResInv HTH_MlrA-CarA Neighborhood of RT #3 [96701, 103274] BcsQ PolY_Pol_V_umuC RVT-GII HNHc SRAP Feature: gene Location: 8520-8984 bp Ori: QGN31338.1 Gene: ssb Feature: domain Description: PRK07275 Location: 8523-8982 bp Feature: domain Description: PRK07275 Location: 8523-8982 bp Feature: gene Location: 8981-10849 bp Ori: QGN31339.1 Feature: domain Description: PRK07726 Location: 9047-10661 bp Feature: domain Description: PRK07726 Location: 9047-1 0661 bp Feature: gene Location: 10946-12832 bp Ori: QGN31340.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11261-11999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 261 -1 1 999 bp Feature: domain Description: HNHc Note: nucleases Location: 12548-12716 bp Feature: domain Description: HNHc Note: nucleases Location: 1 2548-1 271 6 bp Feature: gene Location: 13569-13931 bp Ori: QGN31435.1 Feature: domain Description: PRK07726 Location: 13578-13911 bp Feature: domain Description: PRK07726 Location: 1 3578-1 391 1 bp Feature: gene Location: 14027-14218 bp Feature: gene Location: 57849-58313 bp Ori: QGN31386.1 Gene: ssb Feature: domain Description: PRK07275 Location: 57852-58311 bp Feature: domain Description: PRK07275 Location: 57852-5831 1 bp Feature: gene Location: 58310-60178 bp Ori: QGN31387.1 Feature: domain Description: PRK07726 Location: 58376-59990 bp Feature: domain Description: PRK07726 Location: 58376-59990 bp Feature: gene Location: 60275-62161 bp Ori: QGN31388.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60590-61328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60590-61 328 bp Feature: domain Description: HNHc Note: nucleases Location: 61877-62045 bp Feature: domain Description: HNHc Note: nucleases Location: 61 877-62045 bp Feature: gene Location: 62898-63260 bp Ori: QGN31389.1 Feature: domain Description: PRK07726 Location: 62907-63240 bp Feature: domain Description: PRK07726 Location: 62907-63240 bp Feature: gene Location: 63260-63877 bp Ori: QGN31390.1 Feature: domain Description: SR_ResInv Location: 63269-63656 bp Feature: domain Description: SR_ResInv Location: 63269-63656 bp Feature: domain Description: HTH_MlrA-CarA Location: 63770-63869 bp Feature: domain Description: HTH_MlrA-CarA Location: 63770-63869 bp Feature: gene Location: 96701-97513 bp Ori: QGN31420.1 Feature: domain Description: BcsQ Location: 96716-97484 bp Feature: domain Description: BcsQ Location: 9671 6-97484 bp Feature: gene Location: 98112-99492 bp Feature: domain Description: PolY_Pol_V_umuC Location: 98178-99249 bp Feature: domain Description: PolY_Pol_V_umuC Location: 981 78-99249 bp Feature: gene Location: 100274-102079 bp Ori: QGN31421.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100571-101267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 00571 -1 01 267 bp Feature: domain Description: HNHc Note: nucleases Location: 101831-101966 bp Feature: domain Description: HNHc Note: nucleases Location: 1 01 831 -1 01 966 bp Feature: gene Location: 102182-102592 bp Feature: gene Location: 102684-103274 bp Ori: QGN31442.1 Feature: domain Description: SRAP Location: 102687-103209 bp Feature: domain Description: SRAP Location: 1 02687-1 03209 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07275 (single-stranded DNA-binding protein; Provisional), PRK07726 (DNA topoisomerase 3), RVT-GII, HNHc (smart00507), SR_ResInv (cd03768), HTH_MlrA-CarA (cd01104), BcsQ (COG1192), PolY_Pol_V_umuC (cd01700), SRAP (pfam02586)

Seq: CP046123.1 Enterococcus casseliflavus strain EC291 chromosome, complete genome (3624327 bp)
Overview 1 RT 1: 1051821-1058130 bp 2 RT 2: 1593706-1599402 bp 3 RT 3: 1736052-1741319 bp Neighborhood of RT #1 [1051821, 1058204] PinE PRK07726 RVT-GII HNHc PRK07726 BcsQ Neighborhood of RT #2 [1593706, 1599404] PRK07726 RVT-GII HNHc PRK07726 PRK07275 Neighborhood of RT #3 [1736052, 1741319] RelB_DinJ FtsK_SpoIIIE RVT-GII HNHc FtsK Feature: gene Location: 1051821-1052312 bp Ori: QGN28882.1 Feature: domain Description: PinE Location: 1051872-1052280 bp Feature: domain Description: PinE Location: 1051872 -1052 2 80 bp Feature: gene Location: 1052312-1052674 bp Ori: QGN28883.1 Feature: domain Description: PRK07726 Location: 1052321-1052654 bp Feature: domain Description: PRK0772 6 Location: 1052 32 1-1052 654 bp Feature: gene Location: 1053411-1055297 bp Ori: QGN28884.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1053726-1054464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105372 6-1054464 bp Feature: domain Description: HNHc Note: nucleases Location: 1055013-1055181 bp Feature: domain Description: HNHc Note: nucleases Location: 1055013-1055181 bp Feature: gene Location: 1055550-1057226 bp Ori: QGN28885.1 Feature: domain Description: PRK07726 Location: 1055556-1057074 bp Feature: domain Description: PRK0772 6 Location: 1055556-1057074 bp Feature: gene Location: 1057308-1058204 bp Ori: QGN28886.1 Feature: domain Description: BcsQ Location: 1057440-1058130 bp Feature: domain Description: BcsQ Location: 1057440-1058130 bp Feature: gene Location: 1593706-1593897 bp Feature: gene Location: 1593993-1594355 bp Ori: QGN31261.1 Feature: domain Description: PRK07726 Location: 1594002-1594335 bp Feature: domain Description: PRK0772 6 Location: 1594002 -1594335 bp Feature: gene Location: 1595092-1596978 bp Ori: QGN29392.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1595407-1596145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1595407-1596145 bp Feature: domain Description: HNHc Note: nucleases Location: 1596694-1596862 bp Feature: domain Description: HNHc Note: nucleases Location: 1596694-1596862 bp Feature: gene Location: 1597075-1598943 bp Ori: QGN29393.1 Feature: domain Description: PRK07726 Location: 1597141-1598755 bp Feature: domain Description: PRK0772 6 Location: 1597141-1598755 bp Feature: gene Location: 1598940-1599404 bp Ori: QGN29394.1 Gene: ssb Feature: domain Description: PRK07275 Location: 1598943-1599402 bp Feature: domain Description: PRK072 75 Location: 1598943-1599402 bp Feature: gene Location: 1736052-1736405 bp Ori: QGN29518.1 Feature: domain Description: RelB_DinJ Location: 1736271-1736397 bp Feature: domain Description: RelB_DinJ Location: 17362 71-1736397 bp Feature: gene Location: 1736475-1737491 bp Ori: QGN31265.1 Feature: domain Description: FtsK_SpoIIIE Location: 1737126-1737372 bp Feature: domain Description: FtsK_SpoIIIE Location: 173712 6-1737372 bp Feature: gene Location: 1738085-1739959 bp Ori: QGN29519.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1738451-1739147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1738451-1739147 bp Feature: domain Description: HNHc Note: nucleases Location: 1739687-1739846 bp Feature: domain Description: HNHc Note: nucleases Location: 1739687-1739846 bp Feature: gene Location: 1740031-1740420 bp Feature: domain Description: FtsK Location: 1740049-1740316 bp Feature: domain Description: FtsK Location: 1740049-1740316 bp Feature: gene Location: 1740549-1741319 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), PRK07726 (DNA topoisomerase 3), RVT-GII, HNHc (smart00507), BcsQ (COG1192), PRK07275 (single-stranded DNA-binding protein; Provisional), RelB_DinJ (TIGR02384), FtsK_SpoIIIE (pfam01580), FtsK (COG1674)