myRT

myRT report for GCA_009707405.1_ASM970740v1

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Seq: CP046117.1 Enterobacter cloacae strain CBG15936 plasmid pTEM-CBG, complete sequence (75044 bp)
Overview 1 RT 1: 23111-28008 bp Neighborhood of RT #1 [23111, 28745] DUF1380 RVT_N RVT-GII GIIM HNHc DUF3560 Feature: gene Location: 23111-23533 bp Ori: QGN45262.1 Feature: domain Description: DUF1380 Location: 23114-23408 bp Feature: domain Description: DUF1 380 Location: 231 1 4-23408 bp Feature: gene Location: 23530-23721 bp Feature: gene Location: 24035-25702 bp Ori: QGN45264.1 Gene: ltrA Feature: domain Description: RVT_N Location: 24083-24320 bp Feature: domain Description: RVT_N Location: 24083-24320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24371-25013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24371 -2501 3 bp Feature: domain Description: GIIM Note: maturase Location: 25064-25298 bp Feature: domain Description: GIIM Note: maturase Location: 25064-25298 bp Feature: domain Description: HNHc Note: nucleases Location: 25508-25667 bp Feature: domain Description: HNHc Note: nucleases Location: 25508-25667 bp Feature: gene Location: 27102-27332 bp Feature: gene Location: 27384-28745 bp Ori: QGN45266.1 Feature: domain Description: DUF3560 Location: 27651-28008 bp Feature: domain Description: DUF3560 Location: 27651 -28008 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF3560 (pfam12083)

Seq: CP046116.1 Enterobacter cloacae strain CBG15936 chromosome, complete genome (5033927 bp)
Overview 1 RT 1: 1789798-1793013 bp 2 RT 2: 4302194-4309732 bp Neighborhood of RT #1 [1789798, 1793825] HTH_XRE RVT-Retrons MobA_MobL Neighborhood of RT #2 [4302194, 4309764] TMAO_torS Tar Tar RVT_N RVT-GII GIIM HNHc PAS_3 putres_am_tran Feature: gene Location: 1789798-1790013 bp Feature: gene Location: 1790104-1790385 bp Ori: QGN42212.1 Feature: domain Description: HTH_XRE Location: 1790119-1790284 bp Feature: domain Description: HTH_XRE Location: 1790119-17902 84 bp Feature: gene Location: 1790378-1791478 bp Ori: QGN42213.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1790519-1791074 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1790519-1791074 bp Feature: gene Location: 1791697-1792347 bp Feature: gene Location: 1792425-1793825 bp Ori: QGN42214.1 Feature: domain Description: MobA_MobL Location: 1792476-1793013 bp Feature: domain Description: MobA_MobL Location: 1792 476-1793013 bp Feature: gene Location: 4302194-4303750 bp Ori: QGN44417.1 Feature: domain Description: TMAO_torS Location: 4302218-4302524 bp Feature: domain Description: TMAO_torS Location: 4302 2 18-4302 52 4 bp Feature: domain Description: Tar Location: 4302569-4303730 bp Feature: domain Description: Tar Location: 4302 569-4303730 bp Feature: gene Location: 4304087-4305313 bp Feature: domain Description: Tar Location: 4304333-4305305 bp Feature: domain Description: Tar Location: 4304333-4305305 bp Feature: gene Location: 4305377-4307044 bp Ori: QGN44418.1 Gene: ltrA Feature: domain Description: RVT_N Location: 4305425-4305662 bp Feature: domain Description: RVT_N Location: 430542 5-4305662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4305713-4306355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4305713-4306355 bp Feature: domain Description: GIIM Note: maturase Location: 4306406-4306640 bp Feature: domain Description: GIIM Note: maturase Location: 4306406-4306640 bp Feature: domain Description: HNHc Note: nucleases Location: 4306850-4307009 bp Feature: domain Description: HNHc Note: nucleases Location: 4306850-4307009 bp Feature: gene Location: 4307639-4307950 bp Feature: domain Description: PAS_3 Location: 4307732-4307945 bp Feature: domain Description: PAS_3 Location: 4307732 -4307945 bp Feature: gene Location: 4308358-4309764 bp Ori: QGN44419.1 Gene: ygjG Feature: domain Description: putres_am_tran Location: 4308409-4309732 bp Feature: domain Description: putres_am_tran Location: 4308409-4309732 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, MobA_MobL (pfam03389), TMAO_torS (TIGR02956), Tar (COG0840), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PAS_3 (pfam08447)
putres_am_tran (TIGR03372)