myRT

myRT report for GCA_009720145.1_ASM972014v1

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Seq: CP046256.1 Sphingobium sp. CAP-1 plasmid p3, complete sequence (223979 bp)
Overview 1 RT 1: 63981-73141 bp Neighborhood of RT #1 [63981, 73141] ParB_N_like ArdC RVT-GII Intron_maturas2 HNHc ArdC RVT-GII Intron_maturas2 Feature: gene Location: 63981-66059 bp Ori: QGP81571.1 Feature: domain Description: ParB_N_like Location: 64059-64299 bp Feature: domain Description: ParB_N_like Location: 64059-64299 bp Feature: gene Location: 66144-66317 bp Feature: domain Description: ArdC Location: 66171-66312 bp Feature: domain Description: ArdC Location: 661 71 -6631 2 bp Feature: gene Location: 66959-68862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67226-68063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67226-68063 bp Feature: domain Description: Intron_maturas2 Location: 68150-68432 bp Feature: domain Description: Intron_maturas2 Location: 681 50-68432 bp Feature: domain Description: HNHc Note: nucleases Location: 68582-68756 bp Feature: domain Description: HNHc Note: nucleases Location: 68582-68756 bp Feature: gene Location: 68928-69674 bp Ori: QGP81572.1 Feature: domain Description: ArdC Location: 68934-69636 bp Feature: domain Description: ArdC Location: 68934-69636 bp Feature: gene Location: 69728-69997 bp Feature: gene Location: 70610-72532 bp Ori: QGP81573.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70877-71714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70877-71 71 4 bp Feature: domain Description: Intron_maturas2 Location: 71846-72086 bp Feature: domain Description: Intron_maturas2 Location: 71 846-72086 bp Feature: gene Location: 72553-72894 bp Feature: gene Location: 72935-73141 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParB_N_like (cd16411), ArdC (COG4227), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: CP046252.1 Sphingobium sp. CAP-1 chromosome MIN1, complete sequence (2998318 bp)
Overview 1 RT 1: 276900-281469 bp Neighborhood of RT #1 [276900, 281471] COG3293 RVT-Retrons COG3547 COG5489 Feature: gene Location: 276900-277212 bp Ori: QGP77790.1 Feature: domain Description: COG3293 Location: 276903-277209 bp Feature: domain Description: COG32 93 Location: 2 76903-2 772 09 bp Feature: gene Location: 277212-277666 bp Feature: gene Location: 277708-279318 bp Ori: QGP77791.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 277711-278341 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 77711-2 78341 bp Feature: gene Location: 279916-280965 bp Ori: QGP77792.1 Feature: domain Description: COG3547 Location: 279934-280906 bp Feature: domain Description: COG3547 Location: 2 79934-2 80906 bp Feature: gene Location: 281172-281471 bp Ori: QGP77793.1 Feature: domain Description: COG5489 Location: 281175-281469 bp Feature: domain Description: COG5489 Location: 2 81175-2 81469 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3293 (Transposase ), RVT-Retrons, COG3547 (Transposase ), COG5489 (Uncharacterized conserved protein, DUF736 family )