myRT

myRT report for GCA_009728585.1_ASM972858v1

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Seq: CP040453.1 Halomonas sp. PA16-9 plasmid p_unnamed2, complete sequence (166352 bp)
Overview 1 RT 1: 80834-88216 bp Neighborhood of RT #1 [80834, 88299] COG3333 RVT-GII COG4584 PRK09685 Feature: gene Location: 80834-82336 bp Ori: QGQ72568.1 Feature: domain Description: COG3333 Location: 80837-82307 bp Feature: domain Description: COG3333 Location: 80837-82307 bp Feature: gene Location: 83649-84322 bp Feature: gene Location: 84427-85731 bp Ori: QGQ72569.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84709-85378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84709-85378 bp Feature: gene Location: 86344-87000 bp Ori: QGQ72570.1 Feature: domain Description: COG4584 Location: 86467-86980 bp Feature: domain Description: COG4584 Location: 86467-86980 bp Feature: gene Location: 87280-88299 bp Ori: QGQ72571.1 Feature: domain Description: PRK09685 Location: 87316-88216 bp Feature: domain Description: PRK09685 Location: 8731 6-8821 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3333 (TctA family transporter ), RVT-GII, COG4584 (Transposase ), PRK09685 (DNA-binding transcriptional activator FeaR; Provisional)

Seq: CP040452.1 Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence (1833961 bp)
Overview 1 RT 1: 654919-661976 bp 2 RT 2: 1370893-1380280 bp Neighborhood of RT #1 [654919, 662386] phnR HAD-SF-IB-hyp1 RVT-GII GAF PRK11359 HDOD Neighborhood of RT #2 [1370893, 1380280] recB recD RVT-Retrons CSP_CDS Feature: gene Location: 654919-655629 bp Ori: QGQ71705.1 Feature: domain Description: phnR Location: 654934-655612 bp Feature: domain Description: phnR Location: 654934-655612 bp Feature: gene Location: 655622-656347 bp Ori: QGQ71706.1 Feature: domain Description: HAD-SF-IB-hyp1 Location: 655631-656240 bp Feature: domain Description: HAD-SF-IB-hyp1 Location: 655631-6562 40 bp Feature: gene Location: 656481-657785 bp Ori: QGQ71707.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 656763-657432 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 656763-657432 bp Feature: gene Location: 658433-661209 bp Feature: domain Description: GAF Location: 658616-659003 bp Feature: domain Description: GAF Location: 658616-659003 bp Feature: domain Description: PRK11359 Location: 659147-660944 bp Feature: domain Description: PRK11359 Location: 659147-660944 bp Feature: gene Location: 661262-662386 bp Ori: QGQ71708.1 Feature: domain Description: HDOD Location: 661403-661976 bp Feature: domain Description: HDOD Location: 661403-661976 bp Feature: gene Location: 1370893-1374773 bp Gene: recB Feature: domain Description: recB Location: 1370914-1372357 bp Feature: domain Description: recB Location: 1370914-1372 357 bp Feature: gene Location: 1374809-1377085 bp Ori: QGQ72464.1 Gene: recD Feature: domain Description: recD Location: 1374956-1377080 bp Feature: domain Description: recD Location: 1374956-1377080 bp Feature: gene Location: 1377713-1378894 bp Ori: QGQ72137.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1377857-1378424 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1377857-137842 4 bp Feature: gene Location: 1378905-1379135 bp Ori: QGQ72138.1 Feature: domain Description: CSP_CDS Location: 1378929-1379109 bp Feature: domain Description: CSP_CDS Location: 137892 9-1379109 bp Feature: gene Location: 1379246-1380280 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT phnR (TIGR03337), HAD-SF-IB-hyp1 (TIGR01490), RVT-GII, GAF (smart00065), PRK11359 (cyclic-di-GMP phosphodiesterase; Provisional), HDOD (pfam08668), recB (TIGR00609), recD (TIGR01447), RVT-Retrons, CSP_CDS (cd04458)

Seq: CP040451.1 Halomonas sp. PA16-9 chromosome, complete genome (3515197 bp)
Overview 1 RT 1: 1740267-1746637 bp Neighborhood of RT #1 [1740267, 1746637] Sulfotransfer_2 DAO RVT-GII SDR_e Feature: gene Location: 1740267-1742837 bp Ori: QGQ70022.1 Feature: domain Description: Sulfotransfer_2 Location: 1740624-1741119 bp Feature: domain Description: Sulfotransfer_2 Location: 1740624-1741119 bp Feature: gene Location: 1742834-1743667 bp Ori: QGQ70023.1 Feature: domain Description: DAO Location: 1742855-1743332 bp Feature: domain Description: DAO Location: 1742855-1743 3 3 2 bp Feature: gene Location: 1743748-1745052 bp Ori: QGQ70024.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1744030-1744699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 174403 0-1744699 bp Feature: gene Location: 1745862-1746248 bp Ori: QGQ70025.1 Feature: domain Description: SDR_e Location: 1746060-1746195 bp Feature: domain Description: SDR_e Location: 1746060-1746195 bp Feature: gene Location: 1746200-1746637 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Sulfotransfer_2 (pfam03567), DAO (pfam01266), RVT-GII, SDR_e (cd08946)