myRT

myRT report for GCA_009729915.1_ASM972991v1

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Seq: CP046278.1 Salmonella enterica strain FDAARGOS_708 chromosome, complete genome (5136727 bp)
Overview 1 RT 1: 4523518-4530782 bp Neighborhood of RT #1 [4523518, 4530787] CsgD HTH_Tnp_1 RVT-Retrons TIR_2 Prim_Zn_Ribbon COG3378 DUF5375 Feature: gene Location: 4523518-4524135 bp Ori: QGR35365.1 Feature: domain Description: CsgD Location: 4523947-4524112 bp Feature: domain Description: CsgD Location: 4523947-45241 1 2 bp Feature: gene Location: 4525411-4525536 bp Feature: domain Description: HTH_Tnp_1 Location: 4525426-4525537 bp Feature: domain Description: HTH_Tnp_1 Location: 4525426-4525537 bp Feature: gene Location: 4525899-4527506 bp Ori: QGR36109.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4526190-4526787 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 45261 90-4526787 bp Feature: domain Description: TIR_2 Location: 4527111-4527471 bp Feature: domain Description: TIR_2 Location: 45271 1 1 -4527471 bp Feature: gene Location: 4528119-4530452 bp Ori: QGR35366.1 Feature: domain Description: Prim_Zn_Ribbon Location: 4528209-4528317 bp Feature: domain Description: Prim_Zn_Ribbon Location: 4528209-452831 7 bp Feature: domain Description: COG3378 Location: 4528935-4530444 bp Feature: domain Description: COG3378 Location: 4528935-4530444 bp Feature: gene Location: 4530467-4530787 bp Ori: QGR35367.1 Feature: domain Description: DUF5375 Location: 4530470-4530782 bp Feature: domain Description: DUF5375 Location: 4530470-4530782 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CsgD (COG2771), HTH_Tnp_1 (pfam01527), RVT-Retrons, TIR_2 (pfam13676), Prim_Zn_Ribbon (smart00778), COG3378 (Phage- or plasmid-associated DNA primase ), DUF5375 (pfam17345)