myRT

myRT report for GCA_009731405.1_ASM973140v1

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Seq: AP021880.1 Klebsiella pneumoniae JUNP 254 DNA, complete genome (5422388 bp)
Overview 1 RT 1: 661378-663713 bp 2 RT 2: 2597636-2602299 bp 3 RT 3: 3120564-3124940 bp Neighborhood of RT #1 [661378, 663713] HTH_XRE RVT-Retrons Neighborhood of RT #2 [2597636, 2602301] N6_acetyl_AAC6 RVT-GII GIIM Arr-ms PRK15417 Neighborhood of RT #3 [3120564, 3124945] PRK09951 RVT-UG11 umuC PRK10276 Feature: gene Location: 661378-661677 bp Feature: gene Location: 661714-662022 bp Ori: BBO94818.1 Feature: domain Description: HTH_XRE Location: 661726-661891 bp Feature: domain Description: HTH_XRE Location: 661 726-661 891 bp Feature: gene Location: 662000-662950 bp Ori: BBO94819.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 662180-662723 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6621 80-662723 bp Feature: gene Location: 663089-663520 bp Feature: gene Location: 663519-663713 bp Feature: gene Location: 2597636-2597833 bp Feature: gene Location: 2598054-2598608 bp Ori: BBO96635.1 Feature: domain Description: N6_acetyl_AAC6 Location: 2598060-2598606 bp Feature: domain Description: N6_acetyl_AAC6 Location: 2598060-2598606 bp Feature: gene Location: 2599227-2600582 bp Ori: BBO96636.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2599521-2600145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2599521 -26001 45 bp Feature: domain Description: GIIM Note: maturase Location: 2600184-2600403 bp Feature: domain Description: GIIM Note: maturase Location: 26001 84-2600403 bp Feature: gene Location: 2600663-2601115 bp Ori: BBO96637.1 Feature: domain Description: Arr-ms Location: 2600723-2601029 bp Feature: domain Description: Arr-ms Location: 2600723-2601 029 bp Feature: gene Location: 2601288-2602301 bp Ori: BBO96638.1 Feature: domain Description: PRK15417 Location: 2601291-2602299 bp Feature: domain Description: PRK1 541 7 Location: 2601 291 -2602299 bp Feature: gene Location: 3120564-3120728 bp Feature: gene Location: 3120809-3121477 bp Ori: BBO97148.1 Gene: yedK_2 Feature: domain Description: PRK09951 Location: 3120812-3121475 bp Feature: domain Description: PRK09951 Location: 31 2081 2-31 21 475 bp Feature: gene Location: 3121678-3122586 bp Ori: BBO97149.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 3121951-3122407 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 31 21 951 -31 22407 bp Feature: gene Location: 3123259-3124446 bp Ori: BBO97150.1 Gene: umuC_1 Feature: domain Description: umuC Location: 3123262-3124444 bp Feature: domain Description: umuC Location: 31 23262-31 24444 bp Feature: gene Location: 3124526-3124945 bp Ori: BBO97151.1 Feature: domain Description: PRK10276 Location: 3124529-3124940 bp Feature: domain Description: PRK1 0276 Location: 31 24529-31 24940 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, N6_acetyl_AAC6 (TIGR04431), RVT-GII, GIIM (pfam08388), Arr-ms (pfam12120), PRK15417 (integron integrase), PRK09951 (hypothetical protein; Provisional), RVT-UG11, umuC (PRK03609)
PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)