myRT

myRT report for GCA_009732755.1_ASM973275v1

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Seq: CP037426.1 Wolbachia pipientis strain wIrr chromosome, complete genome (1352354 bp)
Overview 1 RT 1: 317074-321476 bp 2 RT 2: 365601-368905 bp 3 RT 3: 382975-389815 bp 4 RT 4: 448582-457605 bp 5 RT 5: 483228-485866 bp 6 RT 6: 586918-601046 bp 7 RT 7: 783294-785191 bp 8 RT 8: 975713-982121 bp 9 RT 9: 1064256-1068834 bp Neighborhood of RT #1 [317074, 321532] PDDEXK_2 RVT_N RVT-GII YkfC T_den_put_tspse ftsW Neighborhood of RT #2 [365601, 369554] Minor_tail_Z RVT-GII COG3943 Neighborhood of RT #3 [382975, 389850] RVT-GII DDE_3 HTH_Tnp_IS630 RVT-GII PRK07078 AAA_25 sigma70-ECF Neighborhood of RT #4 [448582, 457763] SMC_prok_B RVT-GII GIIM PDDEXK_2 RVT_N RVT-GII DDE_3 HTH_Tnp_IS630 RVT-GII GIIM Transposase_20 Neighborhood of RT #5 [483228, 485866] T_den_put_tspse HNHc RVT-GII GIIM RVT_N RVT-GII DUF4096 Neighborhood of RT #6 [586918, 601285] HTH_21 HTH_Tnp_1 RVT-GII GIIM PDDEXK_2 RVT_N RVT-GII YkfC T_den_put_tspse T_den_put_tspse ANK ANK ANK ANK ANK Latrotoxin_C Neighborhood of RT #7 [783294, 785196] DUF4096 RVT-GII DDE_Tnp_1 DUF4096 Neighborhood of RT #8 [975713, 982180] COG3543 RVT-GII TPR TPR PRK05560 Neighborhood of RT #9 [1064256, 1069031] FbpB PDDEXK_2 RVT_N RVT-GII YkfC PDDEXK_2 Feature: gene Location: 317074-317517 bp Ori: QGT16005.1 Feature: domain Description: PDDEXK_2 Location: 317101-317320 bp Feature: domain Description: PDDEXK_2 Location: 31 71 01 -31 7320 bp Feature: gene Location: 317663-317929 bp Feature: gene Location: 317938-319485 bp Ori: QGT16006.1 Gene: ltrA Feature: domain Description: RVT_N Location: 317989-318226 bp Feature: domain Description: RVT_N Location: 31 7989-31 8226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 318277-318928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 8277-31 8928 bp Feature: domain Description: YkfC Location: 318928-319261 bp Feature: domain Description: YkfC Location: 31 8928-31 9261 bp Feature: gene Location: 319482-320222 bp Ori: QGT16007.1 Feature: domain Description: T_den_put_tspse Location: 319608-320214 bp Feature: domain Description: T_den_put_tspse Location: 31 9608-32021 4 bp Feature: gene Location: 320417-321532 bp Ori: QGT16008.1 Feature: domain Description: ftsW Location: 320450-321476 bp Feature: domain Description: ftsW Location: 320450-321 476 bp Feature: gene Location: 365601-366077 bp Feature: gene Location: 366074-366589 bp Ori: QGT16050.1 Feature: domain Description: Minor_tail_Z Location: 366107-366584 bp Feature: domain Description: Minor_tail_Z Location: 3661 07-366584 bp Feature: gene Location: 366702-368015 bp Ori: QGT16051.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366957-367647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366957-367647 bp Feature: gene Location: 368186-368508 bp Feature: gene Location: 368572-369554 bp Feature: domain Description: COG3943 Location: 368587-368905 bp Feature: domain Description: COG3943 Location: 368587-368905 bp Feature: gene Location: 382975-383280 bp Feature: gene Location: 383253-383608 bp Feature: gene Location: 383779-384249 bp Ori: QGT16064.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 384034-384223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 384034-384223 bp Feature: gene Location: 384246-384737 bp Ori: QGT16065.1 Feature: domain Description: DDE_3 Location: 384273-384672 bp Feature: domain Description: DDE_3 Location: 384273-384672 bp Feature: gene Location: 384757-385104 bp Ori: QGT16066.1 Feature: domain Description: HTH_Tnp_IS630 Location: 384760-385099 bp Feature: domain Description: HTH_Tnp_IS630 Location: 384760-385099 bp Feature: gene Location: 385156-386013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 385162-385645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3851 62-385645 bp Feature: gene Location: 387050-389125 bp Ori: QGT16067.1 Feature: domain Description: PRK07078 Location: 387077-387899 bp Feature: domain Description: PRK07078 Location: 387077-387899 bp Feature: domain Description: AAA_25 Location: 387965-388499 bp Feature: domain Description: AAA_25 Location: 387965-388499 bp Feature: gene Location: 389356-389850 bp Ori: QGT16068.1 Feature: domain Description: sigma70-ECF Location: 389395-389815 bp Feature: domain Description: sigma70-ECF Location: 389395-38981 5 bp Feature: gene Location: 448582-449487 bp Ori: QGT16116.1 Feature: domain Description: SMC_prok_B Location: 448639-449236 bp Feature: domain Description: SMC_prok_B Location: 448639-449236 bp Feature: gene Location: 449594-451294 bp Feature: gene Location: 452132-453379 bp Ori: QGT16118.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 452336-452993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 452336-452993 bp Feature: domain Description: GIIM Note: maturase Location: 453077-453302 bp Feature: domain Description: GIIM Note: maturase Location: 453077-453302 bp Feature: gene Location: 453474-453916 bp Feature: domain Description: PDDEXK_2 Location: 453501-453600 bp Feature: domain Description: PDDEXK_2 Location: 453501 -453600 bp Feature: gene Location: 454062-454328 bp Feature: gene Location: 454337-455059 bp Feature: domain Description: RVT_N Location: 454388-454625 bp Feature: domain Description: RVT_N Location: 454388-454625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 454676-455060 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 454676-455060 bp Feature: gene Location: 455069-455560 bp Ori: QGT16119.1 Feature: domain Description: DDE_3 Location: 455096-455495 bp Feature: domain Description: DDE_3 Location: 455096-455495 bp Feature: gene Location: 455580-455927 bp Ori: QGT16120.1 Feature: domain Description: HTH_Tnp_IS630 Location: 455583-455922 bp Feature: domain Description: HTH_Tnp_IS630 Location: 455583-455922 bp Feature: gene Location: 455978-456805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 455981-456248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 455981 -456248 bp Feature: domain Description: GIIM Note: maturase Location: 456299-456533 bp Feature: domain Description: GIIM Note: maturase Location: 456299-456533 bp Feature: gene Location: 456802-456942 bp Feature: gene Location: 457200-457763 bp Feature: domain Description: Transposase_20 Location: 457353-457605 bp Feature: domain Description: Transposase_20 Location: 457353-457605 bp Feature: gene Location: 483228-483638 bp Ori: QGT16140.1 Feature: domain Description: T_den_put_tspse Location: 483333-483618 bp Feature: domain Description: T_den_put_tspse Location: 483333-48361 8 bp Feature: gene Location: 483635-483742 bp Ori: QGT16933.1 Feature: domain Description: HNHc Note: nucleases Location: 483641-483719 bp Feature: domain Description: HNHc Note: nucleases Location: 483641 -48371 9 bp Feature: gene Location: 483869-484528 bp Ori: QGT16141.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 483890-484109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 483890-4841 09 bp Feature: domain Description: GIIM Note: maturase Location: 484202-484418 bp Feature: domain Description: GIIM Note: maturase Location: 484202-48441 8 bp Feature: gene Location: 484509-485283 bp Feature: domain Description: RVT_N Location: 484545-484785 bp Feature: domain Description: RVT_N Location: 484545-484785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 484839-485124 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 484839-4851 24 bp Feature: gene Location: 485866-486235 bp Ori: QGT16142.1 Feature: domain Description: DUF4096 Location: 485893-486112 bp Feature: domain Description: DUF4096 Location: 485893-4861 1 2 bp Feature: gene Location: 485403-485866 bp Feature: gene Location: 586918-587286 bp Ori: QGT16242.1 Feature: domain Description: HTH_21 Location: 587029-587194 bp Feature: domain Description: HTH_21 Location: 587029-5871 94 bp Feature: gene Location: 587271-587564 bp Ori: QGT16243.1 Feature: domain Description: HTH_Tnp_1 Location: 587280-587445 bp Feature: domain Description: HTH_Tnp_1 Location: 587280-587445 bp Feature: gene Location: 588678-589925 bp Ori: QGT16244.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 588882-589539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 588882-589539 bp Feature: domain Description: GIIM Note: maturase Location: 589623-589848 bp Feature: domain Description: GIIM Note: maturase Location: 589623-589848 bp Feature: gene Location: 590020-590462 bp Feature: domain Description: PDDEXK_2 Location: 590047-590146 bp Feature: domain Description: PDDEXK_2 Location: 590047-5901 46 bp Feature: gene Location: 590608-590874 bp Feature: gene Location: 590883-592430 bp Ori: QGT16245.1 Gene: ltrA Feature: domain Description: RVT_N Location: 590934-591171 bp Feature: domain Description: RVT_N Location: 590934-591 1 71 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 591222-591873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 591 222-591 873 bp Feature: domain Description: YkfC Location: 591873-592206 bp Feature: domain Description: YkfC Location: 591 873-592206 bp Feature: gene Location: 592427-593245 bp Ori: QGT16246.1 Feature: domain Description: T_den_put_tspse Location: 592553-593081 bp Feature: domain Description: T_den_put_tspse Location: 592553-593081 bp Feature: domain Description: T_den_put_tspse Location: 593087-593228 bp Feature: domain Description: T_den_put_tspse Location: 593087-593228 bp Feature: gene Location: 593603-601285 bp Ori: QGT16247.1 Feature: domain Description: ANK Location: 599261-599360 bp Feature: domain Description: ANK Location: 599261 -599360 bp Feature: domain Description: ANK Location: 599525-599750 bp Feature: domain Description: ANK Location: 599525-599750 bp Feature: domain Description: ANK Location: 599750-600020 bp Feature: domain Description: ANK Location: 599750-600020 bp Feature: domain Description: ANK Location: 600053-600230 bp Feature: domain Description: ANK Location: 600053-600230 bp Feature: domain Description: ANK Location: 600245-600500 bp Feature: domain Description: ANK Location: 600245-600500 bp Feature: domain Description: Latrotoxin_C Location: 600710-601046 bp Feature: domain Description: Latrotoxin_C Location: 60071 0-601 046 bp Feature: gene Location: 783294-783663 bp Ori: QGT16395.1 Feature: domain Description: DUF4096 Location: 783321-783540 bp Feature: domain Description: DUF4096 Location: 783321 -783540 bp Feature: gene Location: 783663-784126 bp Feature: gene Location: 784248-784620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 784251-784386 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 784251 -784386 bp Feature: gene Location: 784667-784888 bp Ori: QGT16951.1 Feature: domain Description: DDE_Tnp_1 Location: 784688-784835 bp Feature: domain Description: DDE_Tnp_1 Location: 784688-784835 bp Feature: gene Location: 784993-785196 bp Ori: QGT16396.1 Feature: domain Description: DUF4096 Location: 785011-785191 bp Feature: domain Description: DUF4096 Location: 78501 1 -7851 91 bp Feature: gene Location: 975713-976114 bp Ori: QGT16564.1 Feature: domain Description: COG3543 Location: 975716-976076 bp Feature: domain Description: COG3543 Location: 97571 6-976076 bp Feature: gene Location: 976123-976445 bp Feature: gene Location: 976616-977929 bp Ori: QGT16565.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 976871-977561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 976871 -977561 bp Feature: gene Location: 978196-979071 bp Ori: QGT16566.1 Feature: domain Description: TPR Location: 978496-978697 bp Feature: domain Description: TPR Location: 978496-978697 bp Feature: domain Description: TPR Location: 978784-978976 bp Feature: domain Description: TPR Location: 978784-978976 bp Feature: gene Location: 979472-982180 bp Ori: QGT16567.1 Gene: gyrA Feature: domain Description: PRK05560 Location: 979478-982121 bp Feature: domain Description: PRK05560 Location: 979478-9821 21 bp Feature: gene Location: 1064256-1065854 bp Ori: QGT16641.1 Feature: domain Description: FbpB Location: 1064283-1065840 bp Feature: domain Description: FbpB Location: 1 064283-1 065840 bp Feature: gene Location: 1065865-1066623 bp Ori: QGT16642.1 Feature: domain Description: PDDEXK_2 Location: 1065991-1066462 bp Feature: domain Description: PDDEXK_2 Location: 1 065991 -1 066462 bp Feature: gene Location: 1066620-1068167 bp Ori: QGT16643.1 Gene: ltrA Feature: domain Description: RVT_N Location: 1066671-1066908 bp Feature: domain Description: RVT_N Location: 1 066671 -1 066908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1066959-1067610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 066959-1 06761 0 bp Feature: domain Description: YkfC Location: 1067610-1067943 bp Feature: domain Description: YkfC Location: 1 06761 0-1 067943 bp Feature: gene Location: 1068176-1068442 bp Feature: gene Location: 1068588-1069031 bp Ori: QGT16644.1 Feature: domain Description: PDDEXK_2 Location: 1068615-1068834 bp Feature: domain Description: PDDEXK_2 Location: 1 06861 5-1 068834 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PDDEXK_2 (pfam12784), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), T_den_put_tspse (TIGR01784), ftsW (TIGR02614), Minor_tail_Z (pfam06763), COG3943 (Uncharacterized conserved protein ), DDE_3 (pfam13358), HTH_Tnp_IS630 (pfam01710)
PRK07078 (hypothetical protein; Validated), AAA_25 (pfam13481), sigma70-ECF (TIGR02937), SMC_prok_B (TIGR02168), GIIM (pfam08388), Transposase_20 (pfam02371), HNHc (smart00507), DUF4096 (pfam13340), HTH_21 (pfam13276), HTH_Tnp_1 (pfam01527)
ANK (smart00248), Latrotoxin_C (pfam15658), DDE_Tnp_1 (pfam01609), COG3543 (Uncharacterized protein ), TPR (smart00028), PRK05560 (DNA gyrase subunit A; Validated), FbpB (COG1178)