myRT

myRT report for GCA_009734165.1_ASM973416v1

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Seq: CP046397.1 Bacteroides ovatus strain FDAARGOS_733 chromosome, complete genome (6571392 bp)
Overview 1 RT 1: 1107792-1111404 bp 2 RT 2: 1208517-1219899 bp 3 RT 3: 1934227-1938160 bp 4 RT 4: 6078083-6090507 bp Neighborhood of RT #1 [1107792, 1111430] RVT-DGRs Avd_like DUF1566 Neighborhood of RT #2 [1208517, 1219899] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-DGRs Laminin_G_3 pfam08757 LRR_AMN1 Neighborhood of RT #3 [1934227, 1938160] RVT-UG27 Neighborhood of RT #4 [6078083, 6090623] RVT-Retrons DUF4011 DEXXQc_SF1 DEXXQc_SF1 TIGR00376 MTES_1575 DUF3320 rpsA Feature: gene Location: 1107792-1108031 bp Feature: gene Location: 1108415-1108690 bp Feature: gene Location: 1108656-1110077 bp Ori: QGT70252.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1109028-1109733 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 1 09028-1 1 09733 bp Feature: gene Location: 1110092-1110472 bp Ori: QGT70253.1 Feature: domain Description: Avd_like Location: 1110119-1110425 bp Feature: domain Description: Avd_like Location: 1 1 1 01 1 9-1 1 1 0425 bp Feature: gene Location: 1110618-1111430 bp Ori: QGT70254.1 Feature: domain Description: DUF1566 Location: 1111152-1111404 bp Feature: domain Description: DUF1 566 Location: 1 1 1 1 1 52-1 1 1 1 404 bp Feature: gene Location: 1208517-1209662 bp Ori: QGT70352.1 Feature: domain Description: Arm-DNA-bind_5 Location: 1208541-1208787 bp Feature: domain Description: Arm-DNA-bind_5 Location: 1 208541 -1 208787 bp Feature: domain Description: Phage_int_SAM_5 Location: 1208826-1209111 bp Feature: domain Description: Phage_int_SAM_5 Location: 1 208826-1 2091 1 1 bp Feature: domain Description: INTN1_C_like Location: 1209150-1209624 bp Feature: domain Description: INTN1 _C_like Location: 1 2091 50-1 209624 bp Feature: gene Location: 1209712-1210206 bp Feature: gene Location: 1210208-1211503 bp Ori: QGT70354.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1210424-1211015 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 21 0424-1 21 1 01 5 bp Feature: gene Location: 1211935-1218723 bp Ori: QGT70355.1 Feature: domain Description: Laminin_G_3 Location: 1214374-1214752 bp Feature: domain Description: Laminin_G_3 Location: 1 21 4374-1 21 4752 bp Feature: domain Description: pfam08757 Location: 1215547-1215871 bp Feature: domain Description: pfam08757 Location: 1 21 5547-1 21 5871 bp Feature: domain Description: LRR_AMN1 Location: 1216477-1216948 bp Feature: domain Description: LRR_AMN1 Location: 1 21 6477-1 21 6948 bp Feature: gene Location: 1218733-1219899 bp Feature: gene Location: 1934227-1934706 bp Feature: gene Location: 1934756-1935253 bp Feature: gene Location: 1935576-1936838 bp Ori: QGT70966.1 Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 1935768-1936404 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 1 935768-1 936404 bp Feature: gene Location: 1936831-1937499 bp Feature: gene Location: 1937513-1938160 bp Feature: gene Location: 6078083-6078556 bp Feature: gene Location: 6079267-6081429 bp Feature: gene Location: 6081635-6082765 bp Ori: QGT73712.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6081956-6082499 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6081 956-6082499 bp Feature: gene Location: 6082767-6088724 bp Ori: QGT73713.1 Feature: domain Description: DUF4011 Location: 6083997-6084510 bp Feature: domain Description: DUF401 1 Location: 6083997-608451 0 bp Feature: domain Description: DEXXQc_SF1 Location: 6084849-6085815 bp Feature: domain Description: DEXXQc_SF1 Location: 6084849-608581 5 bp Feature: domain Description: DEXXQc_SF1 Location: 6086277-6087036 bp Feature: domain Description: DEXXQc_SF1 Location: 6086277-6087036 bp Feature: domain Description: TIGR00376 Location: 6087165-6087555 bp Feature: domain Description: TIGR00376 Location: 60871 65-6087555 bp Feature: domain Description: MTES_1575 Location: 6087708-6087993 bp Feature: domain Description: MTES_1 575 Location: 6087708-6087993 bp Feature: domain Description: DUF3320 Location: 6088233-6088374 bp Feature: domain Description: DUF3320 Location: 6088233-6088374 bp Feature: gene Location: 6088821-6090623 bp Ori: QGT73714.1 Gene: rpsA Feature: domain Description: rpsA Location: 6088890-6090507 bp Feature: domain Description: rpsA Location: 6088890-6090507 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603), Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), Laminin_G_3 (pfam13385), pfam08757 (CotH;CotH kinase protein), LRR_AMN1 (sd00034), RVT-UG27
RVT-Retrons, DUF4011 (pfam13195), DEXXQc_SF1 (cd18043), TIGR00376 (DNA helicase, putative), MTES_1575 (pfam18741), DUF3320 (pfam11784), rpsA (TIGR00717)