myRT

myRT report for GCA_009738575.1_ASM973857v1

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Seq: CP046512.1 Bacillus cereus strain JHU plasmid p1, complete sequence (509015 bp)
Overview 1 RT 1: 477773-485368 bp Neighborhood of RT #1 [477773, 485368] rpsA TraG-D_C Ftsk_gamma Ftsk_gamma RVT-GII Intron_maturas2 HNHc Feature: gene Location: 477773-478756 bp Ori: QGV10567.1 Feature: domain Description: rpsA Location: 478040-478577 bp Feature: domain Description: rpsA Location: 478040-478577 bp Feature: gene Location: 478970-480940 bp Feature: domain Description: TraG-D_C Location: 479114-479474 bp Feature: domain Description: TraG-D_C Location: 4791 1 4-479474 bp Feature: domain Description: Ftsk_gamma Location: 479900-480077 bp Feature: domain Description: Ftsk_gamma Location: 479900-480077 bp Feature: domain Description: Ftsk_gamma Location: 480245-480386 bp Feature: domain Description: Ftsk_gamma Location: 480245-480386 bp Feature: gene Location: 481041-482858 bp Ori: QGV10568.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 481311-482133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 481 31 1 -4821 33 bp Feature: domain Description: Intron_maturas2 Location: 482214-482508 bp Feature: domain Description: Intron_maturas2 Location: 48221 4-482508 bp Feature: domain Description: HNHc Note: nucleases Location: 482655-482829 bp Feature: domain Description: HNHc Note: nucleases Location: 482655-482829 bp Feature: gene Location: 483450-484961 bp Feature: gene Location: 484979-485368 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpsA (TIGR00717), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: CP046513.1 Bacillus cereus strain JHU plasmid p2, complete sequence (294504 bp)
Overview 1 RT 1: 91853-95460 bp 2 RT 2: 201559-208409 bp 3 RT 3: 247917-255010 bp Neighborhood of RT #1 [91853, 95460] PRK06760 Transposase_20 RVT-GII RVT-GII Neighborhood of RT #2 [201559, 208409] RVT_N RVT-GII GIIM HNHc DEXDc Neighborhood of RT #3 [247917, 255010] HTH_XRE TraG-D_C Ftsk_gamma RVT-GII Intron_maturas2 HNHc Feature: gene Location: 91853-92548 bp Ori: QGV10641.1 Feature: domain Description: PRK06760 Location: 91856-92528 bp Feature: domain Description: PRK06760 Location: 91856-92 52 8 bp Feature: gene Location: 92665-92957 bp Feature: domain Description: Transposase_20 Location: 92668-92794 bp Feature: domain Description: Transposase_2 0 Location: 92 668-92 794 bp Feature: gene Location: 93544-94283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93721-93814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9372 1-93814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93886-94084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93886-94084 bp Feature: gene Location: 94372-94551 bp Feature: gene Location: 94611-95460 bp Feature: gene Location: 201559-202272 bp Feature: gene Location: 202289-202996 bp Feature: gene Location: 203113-204921 bp Ori: QGV10712.1 Gene: ltrA Feature: domain Description: RVT_N Location: 203164-203404 bp Feature: domain Description: RVT_N Location: 2 03164-2 03404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 203464-204118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 03464-2 04118 bp Feature: domain Description: GIIM Note: maturase Location: 204181-204415 bp Feature: domain Description: GIIM Note: maturase Location: 2 04181-2 04415 bp Feature: domain Description: HNHc Note: nucleases Location: 204628-204775 bp Feature: domain Description: HNHc Note: nucleases Location: 2 0462 8-2 04775 bp Feature: gene Location: 205525-208110 bp Ori: QGV10713.1 Feature: domain Description: DEXDc Location: 206305-207256 bp Feature: domain Description: DEXDc Location: 2 06305-2 072 56 bp Feature: gene Location: 208182-208409 bp Feature: gene Location: 247917-248476 bp Feature: domain Description: HTH_XRE Location: 247929-248100 bp Feature: domain Description: HTH_XRE Location: 2 4792 9-2 48100 bp Feature: gene Location: 248729-250582 bp Ori: QGV10738.1 Feature: domain Description: TraG-D_C Location: 248870-249227 bp Feature: domain Description: TraG-D_C Location: 2 48870-2 492 2 7 bp Feature: domain Description: Ftsk_gamma Location: 249635-249815 bp Feature: domain Description: Ftsk_gamma Location: 2 49635-2 49815 bp Feature: gene Location: 250686-252503 bp Ori: QGV10739.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 250956-251778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 50956-2 51778 bp Feature: domain Description: Intron_maturas2 Location: 251859-252153 bp Feature: domain Description: Intron_maturas2 Location: 2 51859-2 52 153 bp Feature: domain Description: HNHc Note: nucleases Location: 252300-252474 bp Feature: domain Description: HNHc Note: nucleases Location: 2 52 300-2 52 474 bp Feature: gene Location: 253095-254606 bp Feature: gene Location: 254624-255010 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06760 (hypothetical protein; Provisional), Transposase_20 (pfam02371), RVT-GII, RVT_N (pfam13655), GIIM (pfam08388), HNHc (smart00507), DEXDc (smart00487), HTH_XRE (smart00530), TraG-D_C (pfam12696), Ftsk_gamma (smart00843)
Intron_maturas2 (pfam01348)