myRT

myRT report for GCA_009739985.1_ASM973998v1

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Seq: CP040342.1 Bacillus cereus strain DLOU-Weihai chromosome, complete genome (5291741 bp)
Overview 1 RT 1: 200853-207997 bp 2 RT 2: 2606517-2610520 bp Neighborhood of RT #1 [200853, 207997] SLH SLH SLH COG5263 RVT_N RVT-GII GIIM RimL Neighborhood of RT #2 [2606517, 2610606] amiF RVT-GII HNHc amiF YugN Feature: gene Location: 200853-203681 bp Feature: domain Description: SLH Location: 200964-201090 bp Feature: domain Description: SLH Location: 200964-201 090 bp Feature: domain Description: SLH Location: 201138-201264 bp Feature: domain Description: SLH Location: 201 1 38-201 264 bp Feature: domain Description: SLH Location: 201315-201435 bp Feature: domain Description: SLH Location: 201 31 5-201 435 bp Feature: domain Description: COG5263 Location: 201495-201795 bp Feature: domain Description: COG5263 Location: 201 495-201 795 bp Feature: gene Location: 204237-204461 bp Feature: gene Location: 204578-206224 bp Feature: domain Description: RVT_N Location: 204620-204857 bp Feature: domain Description: RVT_N Location: 204620-204857 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 204911-205571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20491 1 -205571 bp Feature: domain Description: GIIM Note: maturase Location: 205640-205871 bp Feature: domain Description: GIIM Note: maturase Location: 205640-205871 bp Feature: gene Location: 206863-207408 bp Feature: domain Description: RimL Location: 206881-207394 bp Feature: domain Description: RimL Location: 206881 -207394 bp Feature: gene Location: 207863-207997 bp Feature: gene Location: 2606517-2606906 bp Feature: domain Description: amiF Location: 2606520-2606892 bp Feature: domain Description: amiF Location: 2606520-2606892 bp Feature: gene Location: 2607053-2607229 bp Feature: gene Location: 2607622-2609454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2607922-2608627 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2607922-2608627 bp Feature: domain Description: HNHc Note: nucleases Location: 2609206-2609338 bp Feature: domain Description: HNHc Note: nucleases Location: 2609206-2609338 bp Feature: gene Location: 2609571-2610194 bp Feature: domain Description: amiF Location: 2609574-2610189 bp Feature: domain Description: amiF Location: 2609574-261 01 89 bp Feature: gene Location: 2610241-2610606 bp Feature: domain Description: YugN Location: 2610259-2610520 bp Feature: domain Description: YugN Location: 261 0259-261 0520 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLH (pfam00395), COG5263 (Glucan-binding domain (YG repeat) ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), RimL (COG1670), amiF (PRK13287), HNHc (smart00507), YugN (pfam08868)

Seq: CP040343.1 Bacillus cereus strain DLOU-Weihai plasmid unnamed1, complete sequence (350199 bp)
Overview 1 RT 1: 148254-157974 bp 2 RT 2: 194405-203257 bp 3 RT 3: 208356-213165 bp 4 RT 4: 257665-267223 bp Neighborhood of RT #1 [148254, 157974] TraC-F-type RVT-GII HNHc TraC-F-type Neighborhood of RT #2 [194405, 203436] TraG-D_C Ftsk_gamma Ftsk_gamma RVT_N RVT-GII GIIM nuc_hydro rpsA Neighborhood of RT #3 [208356, 213170] COG4712 RVT-GII beta_clamp Neighborhood of RT #4 [257665, 267223] DEXDc RVT_N RVT-GII GIIM HNH RVT-GII HNHc Feature: gene Location: 148254-152234 bp Feature: gene Location: 152265-153233 bp Feature: domain Description: TraC-F-type Location: 152292-153072 bp Feature: domain Description: TraC-F-type Location: 152 2 92 -153072 bp Feature: gene Location: 153525-155357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 153825-154530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15382 5-154530 bp Feature: domain Description: HNHc Note: nucleases Location: 155109-155241 bp Feature: domain Description: HNHc Note: nucleases Location: 155109-1552 41 bp Feature: gene Location: 156086-157057 bp Feature: domain Description: TraC-F-type Location: 156506-156980 bp Feature: domain Description: TraC-F-type Location: 156506-156980 bp Feature: gene Location: 157060-157974 bp Feature: gene Location: 194405-194791 bp Feature: gene Location: 194809-198309 bp Feature: domain Description: TraG-D_C Location: 196426-196786 bp Feature: domain Description: TraG-D_C Location: 19642 6-196786 bp Feature: domain Description: Ftsk_gamma Location: 197194-197371 bp Feature: domain Description: Ftsk_gamma Location: 197194-197371 bp Feature: domain Description: Ftsk_gamma Location: 197503-197638 bp Feature: domain Description: Ftsk_gamma Location: 197503-197638 bp Feature: gene Location: 198522-200168 bp Feature: domain Description: RVT_N Location: 198564-198801 bp Feature: domain Description: RVT_N Location: 198564-198801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 198855-199515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 198855-199515 bp Feature: domain Description: GIIM Note: maturase Location: 199584-199815 bp Feature: domain Description: GIIM Note: maturase Location: 199584-199815 bp Feature: gene Location: 200888-201859 bp Feature: domain Description: nuc_hydro Location: 200924-201830 bp Feature: domain Description: nuc_hydro Location: 2 0092 4-2 01830 bp Feature: gene Location: 202453-203436 bp Feature: domain Description: rpsA Location: 202720-203257 bp Feature: domain Description: rpsA Location: 2 02 72 0-2 032 57 bp Feature: gene Location: 208356-208712 bp Feature: domain Description: COG4712 Location: 208365-208707 bp Feature: domain Description: COG4712 Location: 2 08365-2 08707 bp Feature: gene Location: 209136-209276 bp Feature: gene Location: 209471-211372 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 209789-210491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 09789-2 10491 bp Feature: gene Location: 211450-211977 bp Feature: gene Location: 212058-213170 bp Feature: domain Description: beta_clamp Location: 212061-213165 bp Feature: domain Description: beta_clamp Location: 2 12 061-2 13165 bp Feature: gene Location: 257665-257856 bp Feature: gene Location: 257916-260501 bp Feature: domain Description: DEXDc Location: 258693-259647 bp Feature: domain Description: DEXDc Location: 2 58693-2 59647 bp Feature: gene Location: 261073-262884 bp Feature: domain Description: RVT_N Location: 261127-261373 bp Feature: domain Description: RVT_N Location: 2 6112 7-2 61373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 261427-262081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 6142 7-2 62 081 bp Feature: domain Description: GIIM Note: maturase Location: 262144-262378 bp Feature: domain Description: GIIM Note: maturase Location: 2 62 144-2 62 378 bp Feature: domain Description: HNH Note: nucleases Location: 262618-262753 bp Feature: domain Description: HNH Note: nucleases Location: 2 62 618-2 62 753 bp Feature: gene Location: 263736-265634 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 264060-264798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 64060-2 64798 bp Feature: domain Description: HNHc Note: nucleases Location: 265377-265524 bp Feature: domain Description: HNHc Note: nucleases Location: 2 65377-2 6552 4 bp Feature: gene Location: 265967-266473 bp Feature: gene Location: 266525-267223 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraC-F-type (TIGR02746), RVT-GII, HNHc (smart00507), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), RVT_N (pfam13655), GIIM (pfam08388), nuc_hydro (cl00226), rpsA (TIGR00717), COG4712 (Uncharacterized protein )
beta_clamp (cl29549), DEXDc (smart00487), HNH (pfam01844)