myRT

myRT report for GCA_009740045.1_ASM974004v1

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Seq: CP044389.1 Klebsiella pneumoniae strain 2018N17-066 chromosome, complete genome (5292691 bp)
Overview 1 RT 1: 1410926-1415224 bp 2 RT 2: 5011181-5015926 bp Neighborhood of RT #1 [1410926, 1415232] umuC PRK10276 RVT-GII PinE Neighborhood of RT #2 [5011181, 5016539] RVT-Retrons hmuV FepD Feature: gene Location: 1410926-1412191 bp Ori: QGV86637.1 Feature: domain Description: umuC Location: 1410929-1412189 bp Feature: domain Description: umuC Location: 1 41 0929-1 41 21 89 bp Feature: gene Location: 1412193-1412612 bp Ori: QGV86638.1 Gene: umuD Feature: domain Description: PRK10276 Location: 1412196-1412607 bp Feature: domain Description: PRK1 0276 Location: 1 41 21 96-1 41 2607 bp Feature: gene Location: 1412691-1414175 bp Ori: QGV89112.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1413093-1413783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 41 3093-1 41 3783 bp Feature: gene Location: 1414175-1414426 bp Feature: gene Location: 1414783-1415232 bp Ori: QGV89113.1 Feature: domain Description: PinE Location: 1414792-1415224 bp Feature: domain Description: PinE Location: 1 41 4792-1 41 5224 bp Feature: gene Location: 5011181-5012170 bp Feature: gene Location: 5012348-5013010 bp Feature: gene Location: 5013000-5014181 bp Ori: QGV88887.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5013150-5013726 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 501 31 50-501 3726 bp Feature: gene Location: 5014791-5015552 bp Feature: domain Description: hmuV Location: 5014809-5015550 bp Feature: domain Description: hmuV Location: 501 4809-501 5550 bp Feature: gene Location: 5015545-5016539 bp Feature: domain Description: FepD Location: 5015572-5015926 bp Feature: domain Description: FepD Location: 501 5572-501 5926 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, PinE (COG1961), RVT-Retrons, hmuV (PRK13548), FepD (COG0609)

Seq: CP044391.1 Klebsiella pneumoniae strain 2018N17-066 plasmid p2018N17-066-2_MCR8, complete sequence (109789 bp)
Overview 1 RT 1: 27142-31056 bp Neighborhood of RT #1 [27142, 31058] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 27142-27357 bp Ori: QGV89465.1 Feature: domain Description: umuC Location: 27178-27331 bp Feature: domain Description: umuC Location: 2 7178-2 7331 bp Feature: gene Location: 27335-27760 bp Ori: QGV89403.1 Gene: umuD Feature: domain Description: PRK10276 Location: 27338-27746 bp Feature: domain Description: PRK102 76 Location: 2 7338-2 7746 bp Feature: gene Location: 28165-29649 bp Ori: QGV89466.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28567-29257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 8567-2 92 57 bp Feature: gene Location: 29883-30113 bp Feature: gene Location: 30633-31058 bp Ori: QGV89404.1 Feature: domain Description: Antirestrict Location: 30768-31056 bp Feature: domain Description: Antirestrict Location: 30768-31056 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)