myRT

myRT report for GCA_009740065.1_ASM974006v1

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Seq: CP044377.1 Klebsiella pneumoniae strain 2018S06-082 plasmid p2018S06-082-1_MCR1, complete sequence (310104 bp)
Overview 1 RT 1: 38777-42234 bp Neighborhood of RT #1 [38777, 42248] Y1_Tnp InsQ RVT-GII PRK10276 Feature: gene Location: 38777-38992 bp Gene: tnpA Feature: domain Description: Y1_Tnp Location: 38780-38984 bp Feature: domain Description: Y1 _Tnp Location: 38780-38984 bp Feature: gene Location: 38994-39563 bp Feature: domain Description: InsQ Location: 39003-39513 bp Feature: domain Description: InsQ Location: 39003-3951 3 bp Feature: gene Location: 39930-41414 bp Ori: QGV92394.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40332-41022 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40332-41 022 bp Feature: gene Location: 41414-41665 bp Feature: gene Location: 41826-42248 bp Ori: QGV92249.1 Gene: umuD Feature: domain Description: PRK10276 Location: 41832-42234 bp Feature: domain Description: PRK1 0276 Location: 41 832-42234 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Y1_Tnp (pfam01797), InsQ (COG0675), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP044376.1 Klebsiella pneumoniae strain 2018S06-082 chromosome, complete genome (5308286 bp)
Overview 1 RT 1: 3366131-3369963 bp Neighborhood of RT #1 [3366131, 3369963] Tra5 PHA02517 RVT-GII GIIM Feature: gene Location: 3366131-3366565 bp Feature: domain Description: Tra5 Location: 3366179-3366557 bp Feature: domain Description: Tra5 Location: 3366179-3366557 bp Feature: gene Location: 3366645-3367106 bp Feature: domain Description: PHA02517 Location: 3366648-3367098 bp Feature: domain Description: PHA02 517 Location: 3366648-3367098 bp Feature: gene Location: 3367187-3368710 bp Ori: QGV91055.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3367460-3368192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3367460-3368192 bp Feature: domain Description: GIIM Note: maturase Location: 3368306-3368465 bp Feature: domain Description: GIIM Note: maturase Location: 3368306-3368465 bp Feature: gene Location: 3369034-3369376 bp Feature: gene Location: 3369483-3369963 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)