myRT

myRT report for GCA_009740225.1_ASM974022v1

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Seq: CP044381.1 Klebsiella pneumoniae strain 2018S07-013 plasmid p2018S07-013-1, complete sequence (312615 bp)
Overview 1 RT 1: 238883-242346 bp Neighborhood of RT #1 [238883, 242354] PRK10276 RVT-GII InsQ Y1_Tnp Feature: gene Location: 238883-239305 bp Ori: QGV98392.1 Gene: umuD Feature: domain Description: PRK10276 Location: 238889-239291 bp Feature: domain Description: PRK1 0276 Location: 238889-239291 bp Feature: gene Location: 239466-239717 bp Feature: gene Location: 239717-241201 bp Ori: QGV98459.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 240119-240809 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2401 1 9-240809 bp Feature: gene Location: 241568-242137 bp Feature: domain Description: InsQ Location: 241577-242087 bp Feature: domain Description: InsQ Location: 241 577-242087 bp Feature: gene Location: 242139-242354 bp Gene: tnpA Feature: domain Description: Y1_Tnp Location: 242142-242346 bp Feature: domain Description: Y1 _Tnp Location: 2421 42-242346 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsQ (COG0675), Y1_Tnp (pfam01797)

Seq: CP044380.1 Klebsiella pneumoniae strain 2018S07-013 chromosome, complete genome (5142695 bp)
Overview 1 RT 1: 4554825-4562170 bp Neighborhood of RT #1 [4554825, 4562220] FimC FimD RVT-UG4 Integrase_1 PRK09692 Feature: gene Location: 4554825-4555588 bp Feature: domain Description: FimC Location: 4554870-4555524 bp Feature: domain Description: FimC Location: 4554870-455552 4 bp Feature: gene Location: 4555635-4558229 bp Feature: domain Description: FimD Location: 4555677-4558218 bp Feature: domain Description: FimD Location: 4555677-45582 18 bp Feature: gene Location: 4558226-4560306 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4558637-4559081 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4558637-4559081 bp Feature: gene Location: 4560363-4560802 bp Feature: domain Description: Integrase_1 Location: 4560369-4560624 bp Feature: domain Description: Integrase_1 Location: 4560369-456062 4 bp Feature: gene Location: 4560982-4562220 bp Feature: domain Description: PRK09692 Location: 4560988-4562170 bp Feature: domain Description: PRK09692 Location: 4560988-4562 170 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), PRK09692 (Integrase; provisional)