myRT

myRT report for GCA_009755705.1_ASM975570v1

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Seq: CP046613.1 Klebsiella pneumoniae strain WCGKP294 plasmid pWCGKP294-1, complete sequence (237090 bp)
Overview 1 RT 1: 200697-205709 bp Neighborhood of RT #1 [200697, 205709] HHA RVT-GII INT_Cre_C Feature: gene Location: 200697-201764 bp Feature: gene Location: 201850-202104 bp Ori: QGW94833.1 Feature: domain Description: HHA Location: 201901-202084 bp Feature: domain Description: HHA Location: 201 901 -202084 bp Feature: gene Location: 202620-204104 bp Ori: QGW94834.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 203022-203712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 203022-20371 2 bp Feature: gene Location: 204190-205326 bp Ori: QGW94835.1 Feature: domain Description: INT_Cre_C Location: 204613-205267 bp Feature: domain Description: INT_Cre_C Location: 20461 3-205267 bp Feature: gene Location: 205392-205709 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HHA (pfam05321), RVT-GII, INT_Cre_C (cd00799)

Seq: CP046612.1 Klebsiella pneumoniae strain WCGKP294 chromosome, complete genome (5540574 bp)
Overview 1 RT 1: 3305036-3309141 bp 2 RT 2: 4119580-4124843 bp Neighborhood of RT #1 [3305036, 3309152] PRK07006 PRK10276 RVT-GII XerC HTH_Hin_like Neighborhood of RT #2 [4119580, 4124843] PRK10276 RVT-GII Feature: gene Location: 3305036-3305188 bp Ori: QGW92526.1 Feature: domain Description: PRK07006 Location: 3305039-3305186 bp Feature: domain Description: PRK07006 Location: 3305039-3305186 bp Feature: gene Location: 3305367-3305738 bp Ori: QGW92527.1 Feature: domain Description: PRK10276 Location: 3305412-3305574 bp Feature: domain Description: PRK102 76 Location: 3305412 -3305574 bp Feature: gene Location: 3306012-3307496 bp Ori: QGW92528.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3306414-3307104 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3306414-3307104 bp Feature: gene Location: 3308503-3308925 bp Ori: QGW92529.1 Feature: domain Description: XerC Location: 3308578-3308884 bp Feature: domain Description: XerC Location: 3308578-3308884 bp Feature: gene Location: 3309003-3309152 bp Feature: domain Description: HTH_Hin_like Location: 3309018-3309141 bp Feature: domain Description: HTH_Hin_like Location: 3309018-3309141 bp Feature: gene Location: 4119580-4119897 bp Ori: QGW93211.1 Feature: domain Description: PRK10276 Location: 4119586-4119703 bp Feature: domain Description: PRK102 76 Location: 4119586-4119703 bp Feature: gene Location: 4119897-4120136 bp Feature: gene Location: 4120215-4121699 bp Ori: QGW93213.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4120617-4121307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 412 0617-412 1307 bp Feature: gene Location: 4122569-4123663 bp Feature: gene Location: 4123668-4124843 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07006 (isocitrate dehydrogenase; Reviewed), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, XerC (COG4973), HTH_Hin_like (cd00569)

Seq: CP046614.1 Klebsiella pneumoniae strain WCGKP294 plasmid pWCGKP294-2, complete sequence (230910 bp)
Overview 1 RT 1: 165028-172312 bp Neighborhood of RT #1 [165028, 172314] Saf_2TM SAVED AAA_15 TOPRIM_OLD RVT-GII DUF2913 PRK10947 Feature: gene Location: 165028-166095 bp Ori: QGW95030.1 Feature: domain Description: Saf_2TM Location: 165046-165409 bp Feature: domain Description: Saf_2TM Location: 165046-165409 bp Feature: domain Description: SAVED Location: 165487-166072 bp Feature: domain Description: SAVED Location: 165487-166072 bp Feature: gene Location: 166606-168399 bp Ori: QGW95098.1 Feature: domain Description: AAA_15 Location: 166609-167794 bp Feature: domain Description: AAA_15 Location: 166609-167794 bp Feature: domain Description: TOPRIM_OLD Location: 167962-168181 bp Feature: domain Description: TOPRIM_OLD Location: 167962-168181 bp Feature: gene Location: 169168-170652 bp Ori: QGW95031.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 169570-170260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 169570-170260 bp Feature: gene Location: 171171-171779 bp Ori: QGW95032.1 Feature: domain Description: DUF2913 Location: 171267-171669 bp Feature: domain Description: DUF2913 Location: 171267-171669 bp Feature: gene Location: 171916-172314 bp Ori: QGW95033.1 Feature: domain Description: PRK10947 Location: 171919-172312 bp Feature: domain Description: PRK10947 Location: 171919-1723 12 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Saf_2TM (pfam18303), SAVED (pfam18145), AAA_15 (pfam13175), TOPRIM_OLD (cd01026), RVT-GII, DUF2913 (pfam11140), PRK10947 (DNA-binding transcriptional regulator H-NS)