myRT

myRT report for GCA_009763065.1_ASM976306v1

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Seq: CP046749.1 Vibrio cholerae strain 2015V-1118 chromosome 1, complete sequence (2927934 bp)
Overview 1 RT 1: 2633236-2638837 bp Neighborhood of RT #1 [2633236, 2638842] DUF2188 RVT-GII GIIM HNHc RVT_N RVT-GII groEL Feature: gene Location: 2633236-2633796 bp Feature: gene Location: 2634120-2634347 bp Feature: domain Description: DUF2188 Location: 2634135-2634312 bp Feature: domain Description: DUF21 88 Location: 26341 35-263431 2 bp Feature: gene Location: 2634429-2635364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2634432-2634684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2634432-2634684 bp Feature: domain Description: GIIM Note: maturase Location: 2634735-2634969 bp Feature: domain Description: GIIM Note: maturase Location: 2634735-2634969 bp Feature: domain Description: HNHc Note: nucleases Location: 2635185-2635347 bp Feature: domain Description: HNHc Note: nucleases Location: 26351 85-2635347 bp Feature: gene Location: 2635395-2636114 bp Feature: domain Description: RVT_N Location: 2635467-2635710 bp Feature: domain Description: RVT_N Location: 2635467-263571 0 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2635755-2636112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2635755-26361 1 2 bp Feature: gene Location: 2636274-2636546 bp Feature: gene Location: 2637208-2638842 bp Feature: domain Description: groEL Location: 2637214-2638837 bp Feature: domain Description: groEL Location: 263721 4-2638837 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2188 (pfam09954), RVT-GII, GIIM (pfam08388), HNHc (smart00507), RVT_N (pfam13655), groEL (PRK12852)

Seq: CP046750.1 Vibrio cholerae strain 2015V-1118 chromosome 2, complete sequence (1102732 bp)
Overview 1 RT 1: 167984-173205 bp Neighborhood of RT #1 [167984, 173205] PRK10590 SLATT_5 RVT-UG17 PRK05096 Feature: gene Location: 167984-169378 bp Feature: domain Description: PRK10590 Location: 167987-169331 bp Feature: domain Description: PRK10590 Location: 167987-169331 bp Feature: gene Location: 170276-170803 bp Feature: domain Description: SLATT_5 Location: 170285-170717 bp Feature: domain Description: SLATT_5 Location: 1702 85-170717 bp Feature: gene Location: 170927-172258 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 171155-171758 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 171155-171758 bp Feature: gene Location: 172567-172806 bp Feature: domain Description: PRK05096 Location: 172570-172798 bp Feature: domain Description: PRK05096 Location: 172 570-172 798 bp Feature: gene Location: 173074-173205 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10590 (ATP-dependent RNA helicase RhlE; Provisional), SLATT_5 (pfam18160), RVT-UG17, PRK05096 (guanosine 5'-monophosphate oxidoreductase; Provisional)