myRT

myRT report for GCA_009763345.1_ASM976334v1

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Seq: CP046795.1 Vibrio furnissii strain 2420-04 chromosome 1, complete sequence (3348137 bp)
Overview 1 RT 1: 693398-697899 bp 2 RT 2: 1571777-1581638 bp 3 RT 3: 2152445-2155409 bp Neighborhood of RT #1 [693398, 697899] IclR RVT-UG16 HEPN_Apea Neighborhood of RT #2 [1571777, 1581643] PRK11174 PRK11160 RVT-UG8 RVT-UG3 PRK10700 PRK11630 Neighborhood of RT #3 [2152445, 2155409] HTH_XRE RVT-Retrons PRK09692 Feature: gene Location: 693398-694162 bp Feature: domain Description: IclR Location: 693437-694160 bp Feature: domain Description: IclR Location: 693437-6941 60 bp Feature: gene Location: 694248-694439 bp Feature: gene Location: 694613-696094 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 694985-695387 bp Feature: RT Description: RVT-UG1 6 Note: UG1 6 RT Location: 694985-695387 bp Feature: gene Location: 696213-697202 bp Feature: domain Description: HEPN_Apea Location: 696843-697041 bp Feature: domain Description: HEPN_Apea Location: 696843-697041 bp Feature: gene Location: 697624-697899 bp Feature: gene Location: 1571777-1573564 bp Feature: domain Description: PRK11174 Location: 1571780-1573529 bp Feature: domain Description: PRK1 1 1 74 Location: 1 571 780-1 573529 bp Feature: gene Location: 1573557-1575278 bp Feature: domain Description: PRK11160 Location: 1573560-1575273 bp Feature: domain Description: PRK1 1 1 60 Location: 1 573560-1 575273 bp Feature: gene Location: 1576140-1578110 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1576644-1577094 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 576644-1 577094 bp Feature: gene Location: 1578100-1579338 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1578388-1578871 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1 578388-1 578871 bp Feature: gene Location: 1579932-1580876 bp Feature: domain Description: PRK10700 Location: 1579935-1580790 bp Feature: domain Description: PRK1 0700 Location: 1 579935-1 580790 bp Feature: gene Location: 1581023-1581643 bp Feature: domain Description: PRK11630 Location: 1581026-1581638 bp Feature: domain Description: PRK1 1 630 Location: 1 581 026-1 581 638 bp Feature: gene Location: 2152445-2152597 bp Feature: gene Location: 2152634-2152945 bp Feature: domain Description: HTH_XRE Location: 2152646-2152811 bp Feature: domain Description: HTH_XRE Location: 21 52646-21 5281 1 bp Feature: gene Location: 2152920-2153870 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2153106-2153640 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21 531 06-21 53640 bp Feature: gene Location: 2154191-2154325 bp Feature: domain Description: PRK09692 Location: 2154194-2154275 bp Feature: domain Description: PRK09692 Location: 21 541 94-21 54275 bp Feature: gene Location: 2154549-2155409 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IclR (pfam01614), RVT-UG16, HEPN_Apea (pfam18739), PRK11174 (cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed), PRK11160 (cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed), RVT-UG8, RVT-UG3, PRK10700 (23S rRNA pseudouridine(2605) synthase RluB), PRK11630 (threonylcarbamoyl-AMP synthase), HTH_XRE (smart00530)
RVT-Retrons, PRK09692 (Integrase; provisional)