myRT

myRT report for GCA_009763705.1_ASM976370v1

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Seq: CP046802.1 Vibrio cincinnatiensis strain 2070-81 chromosome 1, complete sequence (2805763 bp)
Overview 1 RT 1: 708148-713763 bp 2 RT 2: 776503-781999 bp 3 RT 3: 1221161-1225466 bp Neighborhood of RT #1 [708148, 713807] pssA YhhI YhhI YhhI RVT-GII GIIM HTH_29 DDE_3 Neighborhood of RT #2 [776503, 781999] GT4_CapM-like YhhI YhhI YhhI RVT-GII GIIM Neighborhood of RT #3 [1221161, 1225498] RVT_N RVT-GII GIIM HNHc PRK10938 SapB Feature: gene Location: 708148-709488 bp Feature: domain Description: pssA Location: 708157-709486 bp Feature: domain Description: pssA Location: 7081 57-709486 bp Feature: gene Location: 709818-710951 bp Feature: domain Description: YhhI Location: 709854-710184 bp Feature: domain Description: YhhI Location: 709854-71 01 84 bp Feature: domain Description: YhhI Location: 710244-710529 bp Feature: domain Description: YhhI Location: 71 0244-71 0529 bp Feature: domain Description: YhhI Location: 710601-710871 bp Feature: domain Description: YhhI Location: 71 0601 -71 0871 bp Feature: gene Location: 711186-712511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 711465-712122 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 1 465-71 21 22 bp Feature: domain Description: GIIM Note: maturase Location: 712203-712419 bp Feature: domain Description: GIIM Note: maturase Location: 71 2203-71 241 9 bp Feature: gene Location: 713032-713307 bp Feature: domain Description: HTH_29 Location: 713104-713281 bp Feature: domain Description: HTH_29 Location: 71 31 04-71 3281 bp Feature: gene Location: 713550-713807 bp Feature: domain Description: DDE_3 Location: 713574-713763 bp Feature: domain Description: DDE_3 Location: 71 3574-71 3763 bp Feature: gene Location: 776503-777642 bp Feature: domain Description: GT4_CapM-like Location: 776512-777604 bp Feature: domain Description: GT4_CapM-like Location: 77651 2-777604 bp Feature: gene Location: 777767-778900 bp Feature: domain Description: YhhI Location: 777803-778133 bp Feature: domain Description: YhhI Location: 777803-7781 33 bp Feature: domain Description: YhhI Location: 778193-778478 bp Feature: domain Description: YhhI Location: 7781 93-778478 bp Feature: domain Description: YhhI Location: 778550-778820 bp Feature: domain Description: YhhI Location: 778550-778820 bp Feature: gene Location: 779135-780460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 779414-780071 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77941 4-780071 bp Feature: domain Description: GIIM Note: maturase Location: 780152-780368 bp Feature: domain Description: GIIM Note: maturase Location: 7801 52-780368 bp Feature: gene Location: 780609-780803 bp Feature: gene Location: 780920-781999 bp Feature: gene Location: 1221161-1221325 bp Feature: gene Location: 1221378-1221506 bp Feature: gene Location: 1221531-1223270 bp Feature: domain Description: RVT_N Location: 1221648-1221891 bp Feature: domain Description: RVT_N Location: 1 221 648-1 221 891 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1221936-1222581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 221 936-1 222581 bp Feature: domain Description: GIIM Note: maturase Location: 1222635-1222866 bp Feature: domain Description: GIIM Note: maturase Location: 1 222635-1 222866 bp Feature: domain Description: HNHc Note: nucleases Location: 1223094-1223244 bp Feature: domain Description: HNHc Note: nucleases Location: 1 223094-1 223244 bp Feature: gene Location: 1223532-1225007 bp Feature: domain Description: PRK10938 Location: 1223574-1224969 bp Feature: domain Description: PRK1 0938 Location: 1 223574-1 224969 bp Feature: gene Location: 1225025-1225498 bp Feature: domain Description: SapB Location: 1225079-1225466 bp Feature: domain Description: SapB Location: 1 225079-1 225466 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pssA (TIGR00473), YhhI (COG5433), RVT-GII, GIIM (pfam08388), HTH_29 (pfam13551), DDE_3 (pfam13358), GT4_CapM-like (cd03808), RVT_N (pfam13655), HNHc (smart00507), PRK10938 (putative molybdenum transport ATP-binding protein ModF; Provisional)
SapB (smart00741)

Seq: CP046801.1 Vibrio cincinnatiensis strain 2070-81 chromosome 2, complete sequence (1002147 bp)
Overview 1 RT 1: 455202-459240 bp 2 RT 2: 464764-470939 bp 3 RT 3: 473595-478573 bp 4 RT 4: 532332-537657 bp 5 RT 5: 549783-557079 bp 6 RT 6: 562257-569553 bp Neighborhood of RT #1 [455202, 459356] YhhI YhhI YhhI RVT-GII GIIM TM2 Neighborhood of RT #2 [464764, 470986] YhhI YhhI YhhI RVT-GII GIIM KOG3824 Neighborhood of RT #3 [473595, 478573] YhhI YhhI YhhI RVT-GII GIIM Neighborhood of RT #4 [532332, 537657] GIY-YIG_SF YhhI YhhI YhhI RVT-GII GIIM Neighborhood of RT #5 [549783, 557079] InsE YhhI YhhI YhhI RVT-GII GIIM MhpC Neighborhood of RT #6 [562257, 569553] InsE YhhI YhhI YhhI RVT-GII GIIM MhpC Feature: gene Location: 455202-455366 bp Feature: gene Location: 455370-456503 bp Feature: domain Description: YhhI Location: 455406-455736 bp Feature: domain Description: YhhI Location: 455406-455736 bp Feature: domain Description: YhhI Location: 455796-456084 bp Feature: domain Description: YhhI Location: 455796-456084 bp Feature: domain Description: YhhI Location: 456153-456423 bp Feature: domain Description: YhhI Location: 456153-45642 3 bp Feature: gene Location: 456738-458063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 457017-457674 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 457017-457674 bp Feature: domain Description: GIIM Note: maturase Location: 457755-457971 bp Feature: domain Description: GIIM Note: maturase Location: 457755-457971 bp Feature: gene Location: 458509-458679 bp Feature: gene Location: 458913-459356 bp Feature: domain Description: TM2 Location: 459114-459240 bp Feature: domain Description: TM2 Location: 459114-4592 40 bp Feature: gene Location: 464764-464970 bp Feature: gene Location: 465312-466445 bp Feature: domain Description: YhhI Location: 465348-465678 bp Feature: domain Description: YhhI Location: 465348-465678 bp Feature: domain Description: YhhI Location: 465738-466023 bp Feature: domain Description: YhhI Location: 465738-46602 3 bp Feature: domain Description: YhhI Location: 466095-466365 bp Feature: domain Description: YhhI Location: 466095-466365 bp Feature: gene Location: 466680-468005 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 466959-467616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 466959-467616 bp Feature: domain Description: GIIM Note: maturase Location: 467697-467913 bp Feature: domain Description: GIIM Note: maturase Location: 467697-467913 bp Feature: gene Location: 469832-470014 bp Feature: gene Location: 470273-470986 bp Feature: domain Description: KOG3824 Location: 470360-470939 bp Feature: domain Description: KOG382 4 Location: 470360-470939 bp Feature: gene Location: 473595-473888 bp Feature: gene Location: 474804-475943 bp Feature: domain Description: YhhI Location: 474834-475170 bp Feature: domain Description: YhhI Location: 474834-475170 bp Feature: domain Description: YhhI Location: 475227-475518 bp Feature: domain Description: YhhI Location: 4752 2 7-475518 bp Feature: domain Description: YhhI Location: 475581-475857 bp Feature: domain Description: YhhI Location: 475581-475857 bp Feature: gene Location: 476177-477502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 476456-477113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 476456-477113 bp Feature: domain Description: GIIM Note: maturase Location: 477194-477410 bp Feature: domain Description: GIIM Note: maturase Location: 477194-477410 bp Feature: gene Location: 478268-478396 bp Feature: gene Location: 478400-478573 bp Feature: gene Location: 532332-532784 bp Feature: domain Description: GIY-YIG_SF Location: 532446-532575 bp Feature: domain Description: GIY-YIG_SF Location: 532 446-532 575 bp Feature: gene Location: 532912-534051 bp Feature: domain Description: YhhI Location: 532942-533278 bp Feature: domain Description: YhhI Location: 532 942 -5332 78 bp Feature: domain Description: YhhI Location: 533335-533626 bp Feature: domain Description: YhhI Location: 533335-53362 6 bp Feature: domain Description: YhhI Location: 533689-533965 bp Feature: domain Description: YhhI Location: 533689-533965 bp Feature: gene Location: 534285-535610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 534564-535221 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 534564-5352 2 1 bp Feature: domain Description: GIIM Note: maturase Location: 535302-535518 bp Feature: domain Description: GIIM Note: maturase Location: 535302 -535518 bp Feature: gene Location: 536700-536915 bp Feature: gene Location: 537142-537657 bp Feature: gene Location: 549783-550091 bp Feature: domain Description: InsE Location: 549795-550086 bp Feature: domain Description: InsE Location: 549795-550086 bp Feature: gene Location: 551050-552183 bp Feature: domain Description: YhhI Location: 551086-551416 bp Feature: domain Description: YhhI Location: 551086-551416 bp Feature: domain Description: YhhI Location: 551476-551761 bp Feature: domain Description: YhhI Location: 551476-551761 bp Feature: domain Description: YhhI Location: 551833-552103 bp Feature: domain Description: YhhI Location: 551833-552 103 bp Feature: gene Location: 552418-553743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 552697-553354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 552 697-553354 bp Feature: domain Description: GIIM Note: maturase Location: 553435-553651 bp Feature: domain Description: GIIM Note: maturase Location: 553435-553651 bp Feature: gene Location: 555373-556143 bp Feature: domain Description: MhpC Location: 555391-556126 bp Feature: domain Description: MhpC Location: 555391-55612 6 bp Feature: gene Location: 556864-557079 bp Feature: gene Location: 562257-562565 bp Feature: domain Description: InsE Location: 562269-562560 bp Feature: domain Description: InsE Location: 562 2 69-562 560 bp Feature: gene Location: 563524-564657 bp Feature: domain Description: YhhI Location: 563560-563890 bp Feature: domain Description: YhhI Location: 563560-563890 bp Feature: domain Description: YhhI Location: 563950-564235 bp Feature: domain Description: YhhI Location: 563950-5642 35 bp Feature: domain Description: YhhI Location: 564307-564577 bp Feature: domain Description: YhhI Location: 564307-564577 bp Feature: gene Location: 564892-566217 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 565171-565828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 565171-56582 8 bp Feature: domain Description: GIIM Note: maturase Location: 565909-566125 bp Feature: domain Description: GIIM Note: maturase Location: 565909-56612 5 bp Feature: gene Location: 567847-568617 bp Feature: domain Description: MhpC Location: 567865-568600 bp Feature: domain Description: MhpC Location: 567865-568600 bp Feature: gene Location: 569338-569553 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), RVT-GII, GIIM (pfam08388), TM2 (pfam05154), KOG3824 (KOG3824, Huntingtin interacting protein HYPE ), GIY-YIG_SF (cl15257), InsE (COG2963), MhpC (COG0596)