myRT

myRT report for GCA_009769185.1_ASM976918v1

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Seq: CP039261.1 Lactobacillus johnsonii strain DC22.2 chromosome, complete genome (1904421 bp)
Overview 1 RT 1: 434025-439315 bp Neighborhood of RT #1 [434025, 439320] rplL Ion_trans_2 RVT-GII YkfC GIIM HTH_3 RGG_Cterm antibiot_sagB Feature: gene Location: 434025-434387 bp Ori: QGY96192.1 Feature: domain Description: rplL Location: 434028-434385 bp Feature: domain Description: rplL Location: 434028-434385 bp Feature: gene Location: 434417-435301 bp Ori: QGY96193.1 Feature: domain Description: Ion_trans_2 Location: 434861-435089 bp Feature: domain Description: Ion_trans_2 Location: 434861 -435089 bp Feature: gene Location: 435919-437109 bp Ori: QGY96194.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 436120-436294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4361 20-436294 bp Feature: domain Description: YkfC Location: 436294-436639 bp Feature: domain Description: YkfC Location: 436294-436639 bp Feature: domain Description: GIIM Note: maturase Location: 436687-436894 bp Feature: domain Description: GIIM Note: maturase Location: 436687-436894 bp Feature: gene Location: 437168-438028 bp Ori: QGY96195.1 Feature: domain Description: HTH_3 Location: 437207-437360 bp Feature: domain Description: HTH_3 Location: 437207-437360 bp Feature: domain Description: RGG_Cterm Location: 437399-438008 bp Feature: domain Description: RGG_Cterm Location: 437399-438008 bp Feature: gene Location: 438490-439320 bp Ori: QGY96196.1 Feature: domain Description: antibiot_sagB Location: 438886-439315 bp Feature: domain Description: antibiot_sagB Location: 438886-43931 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rplL (PRK00157), Ion_trans_2 (pfam07885), RVT-GII, YkfC (COG3344), GIIM (pfam08388), HTH_3 (pfam01381), RGG_Cterm (TIGR01716), antibiot_sagB (TIGR03605)