myRT

myRT report for GCA_009789675.1_ASM978967v1

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Seq: CP046913.1 Paraburkholderia sp. DHF22 chromosome 1, complete sequence (3240103 bp)
Overview 1 RT 1: 2824986-2832418 bp Neighborhood of RT #1 [2824986, 2832474] HsdM N6_Mtase RVT-CRISPR-like AlpA PRK09692 Feature: gene Location: 2824986-2827799 bp Ori: QGZ62471.1 Feature: domain Description: HsdM Location: 2826123-2826186 bp Feature: domain Description: HsdM Location: 28261 23-28261 86 bp Feature: domain Description: N6_Mtase Location: 2826624-2826972 bp Feature: domain Description: N6_Mtase Location: 2826624-2826972 bp Feature: gene Location: 2828147-2828578 bp Feature: gene Location: 2828784-2830124 bp Ori: QGZ62473.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2829390-2829744 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2829390-2829744 bp Feature: gene Location: 2830127-2830327 bp Ori: QGZ62474.1 Feature: domain Description: AlpA Location: 2830139-2830310 bp Feature: domain Description: AlpA Location: 28301 39-283031 0 bp Feature: gene Location: 2831251-2832474 bp Ori: QGZ62475.1 Feature: domain Description: PRK09692 Location: 2831263-2832418 bp Feature: domain Description: PRK09692 Location: 2831 263-283241 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), N6_Mtase (pfam02384), RVT-CRISPR, AlpA (COG3311), PRK09692 (Integrase; provisional)

Seq: CP046915.1 Paraburkholderia sp. DHF22 chromosome 3, complete sequence (1436412 bp)
Overview 1 RT 1: 18086-23195 bp Neighborhood of RT #1 [18086, 23215] Acetyltransf_1 DUF3396 DUF3396 RVT-Retrons COG4339 Feature: gene Location: 18086-18538 bp Ori: QGZ64579.1 Feature: domain Description: Acetyltransf_1 Location: 18185-18473 bp Feature: domain Description: Acetyltransf_1 Location: 18185-18473 bp Feature: gene Location: 18579-19733 bp Ori: QGZ64580.1 Feature: domain Description: DUF3396 Location: 19017-19260 bp Feature: domain Description: DUF3396 Location: 19017-192 60 bp Feature: domain Description: DUF3396 Location: 19371-19677 bp Feature: domain Description: DUF3396 Location: 19371-19677 bp Feature: gene Location: 19817-21154 bp Ori: QGZ64581.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 20282-20918 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 02 82 -2 0918 bp Feature: gene Location: 21885-22331 bp Feature: gene Location: 22526-23215 bp Ori: QGZ64583.1 Feature: domain Description: COG4339 Location: 22604-23195 bp Feature: domain Description: COG4339 Location: 2 2 604-2 3195 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_1 (pfam00583), DUF3396 (pfam11876), RVT-Retrons, COG4339 (Predicted metal-dependent phosphohydrolase, HD superfamily )