myRT

myRT report for GCA_009791495.1_ASM979149v1

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Seq: CP046939.1 Klebsiella pneumoniae strain BD_DM_697 chromosome, complete genome (5359090 bp)
Overview 1 RT 1: 785923-793271 bp Neighborhood of RT #1 [785923, 793321] FimC FimD RVT-UG4 Integrase_1 PRK09692 Feature: gene Location: 785923-786687 bp Ori: QGZ81577.1 Feature: domain Description: FimC Location: 785968-786670 bp Feature: domain Description: FimC Location: 785968-786670 bp Feature: gene Location: 786734-789328 bp Ori: QGZ85592.1 Feature: domain Description: FimD Location: 786776-789317 bp Feature: domain Description: FimD Location: 786776-78931 7 bp Feature: gene Location: 789325-791406 bp Ori: QGZ81578.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 789736-790180 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 789736-7901 80 bp Feature: gene Location: 791448-791903 bp Ori: QGZ85593.1 Feature: domain Description: Integrase_1 Location: 791451-791685 bp Feature: domain Description: Integrase_1 Location: 791 451 -791 685 bp Feature: gene Location: 792083-793321 bp Feature: domain Description: PRK09692 Location: 792089-793271 bp Feature: domain Description: PRK09692 Location: 792089-793271 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), PRK09692 (Integrase; provisional)

Seq: CP046940.1 Klebsiella pneumoniae strain BD_DM_697 plasmid punnamed1 (153682 bp)
Overview 1 RT 1: 131286-136303 bp Neighborhood of RT #1 [131286, 136305] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 131286-132558 bp Gene: umuC Feature: domain Description: umuC Location: 131289-132285 bp Feature: domain Description: umuC Location: 1312 89-132 2 85 bp Feature: gene Location: 132558-132983 bp Ori: QGZ85899.1 Gene: umuD Feature: domain Description: PRK10276 Location: 132561-132969 bp Feature: domain Description: PRK102 76 Location: 132 561-132 969 bp Feature: gene Location: 133388-134896 bp Ori: QGZ85932.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 133790-134504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 133790-134504 bp Feature: gene Location: 135130-135360 bp Feature: gene Location: 135880-136305 bp Ori: QGZ85900.1 Feature: domain Description: Antirestrict Location: 136015-136303 bp Feature: domain Description: Antirestrict Location: 136015-136303 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)