myRT

myRT report for GCA_009796305.1_ASM979630v1

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Seq: CP046996.1 Dehalobacter restrictus strain 12DCA chromosome, complete genome (3049426 bp)
Overview 1 RT 1: 852008-857617 bp 2 RT 2: 1526102-1534944 bp 3 RT 3: 2195833-2203127 bp 4 RT 4: 2214360-2220126 bp Neighborhood of RT #1 [852008, 857724] NtcA_cyano Crp RVT-GII GIIM TAT_signal RDH Neighborhood of RT #2 [1526102, 1535372] PRK14328 PRK05399 RVT-UG7 HyuA AcuC Neighborhood of RT #3 [2195833, 2203402] DUF3991 Toprim_2 MobL SLR SLR SEL1 SLR SLR RVT-GII Intron_maturas2 MobL RHH_1 Neighborhood of RT #4 [2214360, 2220126] DUF3852 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 852008-852703 bp Ori: QGZ99914.1 Feature: domain Description: NtcA_cyano Location: 852122-852662 bp Feature: domain Description: NtcA_cyano Location: 8521 22-852662 bp Feature: gene Location: 853186-853863 bp Ori: QGZ99915.1 Feature: domain Description: Crp Location: 853273-853831 bp Feature: domain Description: Crp Location: 853273-853831 bp Feature: gene Location: 854293-855702 bp Ori: QGZ99916.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 854647-855265 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 854647-855265 bp Feature: domain Description: GIIM Note: maturase Location: 855316-855547 bp Feature: domain Description: GIIM Note: maturase Location: 85531 6-855547 bp Feature: gene Location: 856006-856317 bp Feature: gene Location: 856333-857724 bp Ori: QGZ99918.1 Feature: domain Description: TAT_signal Location: 856363-856435 bp Feature: domain Description: TAT_signal Location: 856363-856435 bp Feature: domain Description: RDH Location: 856786-857617 bp Feature: domain Description: RDH Location: 856786-85761 7 bp Feature: gene Location: 1526102-1527436 bp Ori: QHA00505.1 Gene: miaB Feature: domain Description: PRK14328 Location: 1526123-1527425 bp Feature: domain Description: PRK1 4328 Location: 1 5261 23-1 527425 bp Feature: gene Location: 1527433-1529985 bp Ori: QHA00506.1 Gene: mutS Feature: domain Description: PRK05399 Location: 1527439-1529965 bp Feature: domain Description: PRK05399 Location: 1 527439-1 529965 bp Feature: gene Location: 1530373-1531944 bp Ori: QHA00507.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1530781-1531183 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1 530781 -1 531 1 83 bp Feature: gene Location: 1532374-1534044 bp Ori: QHA00508.1 Feature: domain Description: HyuA Location: 1532386-1533577 bp Feature: domain Description: HyuA Location: 1 532386-1 533577 bp Feature: gene Location: 1534041-1535372 bp Ori: QHA00509.1 Feature: domain Description: AcuC Location: 1534245-1534944 bp Feature: domain Description: AcuC Location: 1 534245-1 534944 bp Feature: gene Location: 2195833-2197266 bp Ori: QHA01077.1 Feature: domain Description: DUF3991 Location: 2196190-2196415 bp Feature: domain Description: DUF3991 Location: 21 961 90-21 9641 5 bp Feature: domain Description: Toprim_2 Location: 2196430-2196703 bp Feature: domain Description: Toprim_2 Location: 21 96430-21 96703 bp Feature: gene Location: 2197433-2199862 bp Ori: QHA01078.1 Feature: domain Description: MobL Location: 2197484-2198024 bp Feature: domain Description: MobL Location: 21 97484-21 98024 bp Feature: domain Description: SLR Location: 2198186-2198378 bp Feature: domain Description: SLR Location: 21 981 86-21 98378 bp Feature: domain Description: SLR Location: 2198399-2198726 bp Feature: domain Description: SLR Location: 21 98399-21 98726 bp Feature: domain Description: SEL1 Location: 2198777-2198873 bp Feature: domain Description: SEL1 Location: 21 98777-21 98873 bp Feature: domain Description: SLR Location: 2198927-2199212 bp Feature: domain Description: SLR Location: 21 98927-21 9921 2 bp Feature: domain Description: SLR Location: 2199266-2199647 bp Feature: domain Description: SLR Location: 21 99266-21 99647 bp Feature: gene Location: 2199952-2201778 bp Ori: QHA01079.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2200222-2201053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2200222-2201 053 bp Feature: domain Description: Intron_maturas2 Location: 2201140-2201425 bp Feature: domain Description: Intron_maturas2 Location: 2201 1 40-2201 425 bp Feature: gene Location: 2202387-2202992 bp Feature: domain Description: MobL Location: 2202390-2202993 bp Feature: domain Description: MobL Location: 2202390-2202993 bp Feature: gene Location: 2202995-2203402 bp Ori: QHA01080.1 Feature: domain Description: RHH_1 Location: 2203022-2203127 bp Feature: domain Description: RHH_1 Location: 2203022-22031 27 bp Feature: gene Location: 2214360-2214812 bp Feature: gene Location: 2214824-2215165 bp Ori: QHA01940.1 Feature: domain Description: DUF3852 Location: 2214830-2215157 bp Feature: domain Description: DUF3852 Location: 221 4830-221 51 57 bp Feature: gene Location: 2215506-2217335 bp Ori: QHA01096.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2215770-2216607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 221 5770-221 6607 bp Feature: domain Description: Intron_maturas2 Location: 2216679-2217000 bp Feature: domain Description: Intron_maturas2 Location: 221 6679-221 7000 bp Feature: domain Description: HNHc Note: nucleases Location: 2217156-2217306 bp Feature: domain Description: HNHc Note: nucleases Location: 221 71 56-221 7306 bp Feature: gene Location: 2217826-2219517 bp Feature: gene Location: 2219587-2220126 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NtcA_cyano (TIGR03697), Crp (pfam00325), RVT-GII, GIIM (pfam08388), TAT_signal (pfam10518), RDH (TIGR02486), PRK14328 ((dimethylallyl)adenosine tRNA methylthiotransferase; Provisional), PRK05399 (DNA mismatch repair protein MutS; Provisional), RVT-UG7, HyuA (COG0145)
AcuC (COG0123), DUF3991 (pfam13154), Toprim_2 (pfam13155), MobL (pfam18555), SLR (sd00010), SEL1 (smart00671), Intron_maturas2 (pfam01348), RHH_1 (pfam01402), DUF3852 (pfam12963), HNHc (smart00507)