myRT

myRT report for GCA_009796785.1_ASM979678v1

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Seq: CP047026.1 Polaribacter sp. L3A8 chromosome, complete genome (4224107 bp)
Overview 1 RT 1: 1549967-1553443 bp 2 RT 2: 1568387-1572603 bp 3 RT 3: 3883361-3889952 bp Neighborhood of RT #1 [1549967, 1553443] CcmA RVT-UG12 Neighborhood of RT #2 [1568387, 1572683] ABC_YhbG RVT-UG12 HTH_Tnp_1 Neighborhood of RT #3 [3883361, 3890941] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like VirE_N RVT-UG28b Tra8 AAA_21 Feature: gene Location: 1549967-1550368 bp Feature: domain Description: CcmA Location: 1549982-1550273 bp Feature: domain Description: CcmA Location: 1 549982-1 550273 bp Feature: gene Location: 1551073-1551204 bp Feature: gene Location: 1551429-1552181 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 1551882-1552155 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 1 551 882-1 5521 55 bp Feature: gene Location: 1552575-1553267 bp Feature: gene Location: 1553306-1553443 bp Feature: gene Location: 1568387-1568518 bp Feature: gene Location: 1569097-1569756 bp Feature: domain Description: ABC_YhbG Location: 1569115-1569736 bp Feature: domain Description: ABC_YhbG Location: 1 5691 1 5-1 569736 bp Feature: gene Location: 1569910-1571928 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 1570366-1570843 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 1 570366-1 570843 bp Feature: gene Location: 1572154-1572327 bp Feature: gene Location: 1572372-1572683 bp Feature: domain Description: HTH_Tnp_1 Location: 1572384-1572603 bp Feature: domain Description: HTH_Tnp_1 Location: 1 572384-1 572603 bp Feature: gene Location: 3883361-3884599 bp Feature: domain Description: Arm-DNA-bind_5 Location: 3883430-3883625 bp Feature: domain Description: Arm-DNA-bind_5 Location: 3883430-3883625 bp Feature: domain Description: Phage_int_SAM_5 Location: 3883694-3883991 bp Feature: domain Description: Phage_int_SAM_5 Location: 3883694-3883991 bp Feature: domain Description: INTN1_C_like Location: 3884042-3884558 bp Feature: domain Description: INTN1 _C_like Location: 3884042-3884558 bp Feature: gene Location: 3884807-3885832 bp Feature: domain Description: VirE_N Location: 3884996-3885365 bp Feature: domain Description: VirE_N Location: 3884996-3885365 bp Feature: gene Location: 3885971-3887770 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 3886457-3887168 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 3886457-38871 68 bp Feature: gene Location: 3887993-3888997 bp Feature: domain Description: Tra8 Location: 3888011-3888974 bp Feature: domain Description: Tra8 Location: 388801 1 -3888974 bp Feature: gene Location: 3889037-3890941 bp Feature: domain Description: AAA_21 Location: 3889067-3889952 bp Feature: domain Description: AAA_21 Location: 3889067-3889952 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CcmA (COG4133), RVT-UG12, ABC_YhbG (cd03218), HTH_Tnp_1 (pfam01527), Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), VirE_N (pfam08800), RVT-UG28b, Tra8 (COG2826)
AAA_21 (pfam13304)