myRT

myRT report for GCA_009800225.1_ASM980022v1

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Seq: CP047073.1 Pseudomonas syringae pv. tomato strain delta X chromosome, complete genome (6397114 bp)
Overview 1 RT 1: 2378721-2386735 bp 2 RT 2: 3759075-3765234 bp Neighborhood of RT #1 [2378721, 2386773] PRK05298 RVT-GII GIIM gltX COG3547 Neighborhood of RT #2 [3759075, 3765272] COG3547 RVT-GII GIIM solA type_I_sec_TolC Feature: gene Location: 2378721-2380736 bp Feature: domain Description: PRK05298 Location: 2378727-2380725 bp Feature: domain Description: PRK05298 Location: 2378727-2380725 bp Feature: gene Location: 2380939-2381160 bp Feature: gene Location: 2381163-2382530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2381496-2382111 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2381 496-23821 1 1 bp Feature: domain Description: GIIM Note: maturase Location: 2382168-2382396 bp Feature: domain Description: GIIM Note: maturase Location: 23821 68-2382396 bp Feature: gene Location: 2383121-2384602 bp Feature: domain Description: gltX Location: 2383127-2384531 bp Feature: domain Description: gltX Location: 23831 27-2384531 bp Feature: gene Location: 2385751-2386773 bp Feature: domain Description: COG3547 Location: 2385772-2386735 bp Feature: domain Description: COG3547 Location: 2385772-2386735 bp Feature: gene Location: 3759075-3759230 bp Feature: gene Location: 3759361-3760383 bp Feature: domain Description: COG3547 Location: 3759382-3760345 bp Feature: domain Description: COG3547 Location: 3759382-3760345 bp Feature: gene Location: 3760735-3762102 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3761068-3761683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3761 068-3761 683 bp Feature: domain Description: GIIM Note: maturase Location: 3761740-3761968 bp Feature: domain Description: GIIM Note: maturase Location: 3761 740-3761 968 bp Feature: gene Location: 3762726-3763901 bp Feature: domain Description: solA Location: 3762735-3763890 bp Feature: domain Description: solA Location: 3762735-3763890 bp Feature: gene Location: 3763902-3765272 bp Feature: domain Description: type_I_sec_TolC Location: 3763989-3765234 bp Feature: domain Description: type_I_sec_TolC Location: 3763989-3765234 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05298 (excinuclease ABC subunit UvrB), RVT-GII, GIIM (pfam08388), gltX (PRK14895), COG3547 (Transposase ), solA (PRK11259), type_I_sec_TolC (TIGR01844)