myRT

myRT report for GCA_009834475.1_ASM983447v1

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Seq: CP013210.1 Empedobacter brevis strain BCLYD2 chromosome, complete genome (3794924 bp)
Overview 1 RT 1: 1701762-1707651 bp 2 RT 2: 1983926-1986707 bp 3 RT 3: 3325971-3331809 bp Neighborhood of RT #1 [1701762, 1707695] DUF4141 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF4133 Neighborhood of RT #2 [1983926, 1986874] RVT-DGRs NinB Neighborhood of RT #3 [3325971, 3331856] DUF4141 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF4133 Feature: gene Location: 1701762-1702403 bp Ori: QHC86632.1 Feature: domain Description: DUF4141 Location: 1701786-1701942 bp Feature: domain Description: DUF41 41 Location: 1 701 786-1 701 942 bp Feature: gene Location: 1702470-1704749 bp Feature: domain Description: Bac_Flav_CT_G Location: 1702473-1704726 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 702473-1 704726 bp Feature: gene Location: 1704860-1706521 bp Ori: QHC84721.1 Feature: domain Description: RVT_N Location: 1704914-1705157 bp Feature: domain Description: RVT_N Location: 1 70491 4-1 7051 57 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1705202-1705850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 705202-1 705850 bp Feature: domain Description: GIIM Note: maturase Location: 1705901-1706135 bp Feature: domain Description: GIIM Note: maturase Location: 1 705901 -1 7061 35 bp Feature: gene Location: 1707121-1707366 bp Ori: QHC84722.1 Feature: domain Description: Bac_Flav_CT_G Location: 1707124-1707358 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 7071 24-1 707358 bp Feature: gene Location: 1707363-1707695 bp Ori: QHC84723.1 Feature: domain Description: DUF4133 Location: 1707381-1707651 bp Feature: domain Description: DUF41 33 Location: 1 707381 -1 707651 bp Feature: gene Location: 1983926-1984387 bp Feature: gene Location: 1984390-1984872 bp Feature: gene Location: 1985086-1986114 bp Ori: QHC84946.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1985293-1985881 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 985293-1 985881 bp Feature: gene Location: 1986029-1986325 bp Feature: gene Location: 1986443-1986874 bp Ori: QHC84948.1 Feature: domain Description: NinB Location: 1986473-1986707 bp Feature: domain Description: NinB Location: 1 986473-1 986707 bp Feature: gene Location: 3325971-3326603 bp Ori: QHC86156.1 Feature: domain Description: DUF4141 Location: 3325989-3326142 bp Feature: domain Description: DUF41 41 Location: 3325989-33261 42 bp Feature: gene Location: 3326631-3328910 bp Feature: domain Description: Bac_Flav_CT_G Location: 3326634-3328887 bp Feature: domain Description: Bac_Flav_CT_G Location: 3326634-3328887 bp Feature: gene Location: 3329021-3330682 bp Ori: QHC86157.1 Feature: domain Description: RVT_N Location: 3329075-3329318 bp Feature: domain Description: RVT_N Location: 3329075-332931 8 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3329363-3330011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3329363-333001 1 bp Feature: domain Description: GIIM Note: maturase Location: 3330062-3330296 bp Feature: domain Description: GIIM Note: maturase Location: 3330062-3330296 bp Feature: gene Location: 3331282-3331527 bp Ori: QHC86158.1 Feature: domain Description: Bac_Flav_CT_G Location: 3331285-3331519 bp Feature: domain Description: Bac_Flav_CT_G Location: 3331 285-3331 51 9 bp Feature: gene Location: 3331524-3331856 bp Ori: QHC86159.1 Feature: domain Description: DUF4133 Location: 3331542-3331809 bp Feature: domain Description: DUF41 33 Location: 3331 542-3331 809 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4141 (pfam13605), Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF4133 (pfam13571), RVT-DGRs, NinB (pfam05772)