myRT

myRT report for GCA_009846595.1_ASM984659v1

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Seq: CP047422.1 Shewanella algae strain 18064-CSB-B-B chromosome, complete genome (4754321 bp)
Overview 1 RT 1: 1133306-1138084 bp Neighborhood of RT #1 [1133306, 1138098] PRK06302 PRK06302 YegP RVT_N RVT-GII YkfC HNH L31 FimV_core Feature: gene Location: 1133306-1133686 bp Ori: QHD52722.1 Feature: domain Description: PRK06302 Location: 1133309-1133426 bp Feature: domain Description: PRK06302 Location: 1 1 33309-1 1 33426 bp Feature: domain Description: PRK06302 Location: 1133453-1133681 bp Feature: domain Description: PRK06302 Location: 1 1 33453-1 1 33681 bp Feature: gene Location: 1133878-1134030 bp Ori: QHD52723.1 Feature: domain Description: YegP Location: 1133881-1133998 bp Feature: domain Description: YegP Location: 1 1 33881 -1 1 33998 bp Feature: gene Location: 1134153-1135811 bp Ori: QHD52724.1 Gene: ltrA Feature: domain Description: RVT_N Location: 1134210-1134453 bp Feature: domain Description: RVT_N Location: 1 1 3421 0-1 1 34453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1134498-1135140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 34498-1 1 351 40 bp Feature: domain Description: YkfC Location: 1135149-1135449 bp Feature: domain Description: YkfC Location: 1 1 351 49-1 1 35449 bp Feature: domain Description: HNH Note: nucleases Location: 1135668-1135800 bp Feature: domain Description: HNH Note: nucleases Location: 1 1 35668-1 1 35800 bp Feature: gene Location: 1136880-1137092 bp Ori: QHD52725.1 Gene: rpmE Feature: domain Description: L31 Location: 1136883-1137078 bp Feature: domain Description: L31 Location: 1 1 36883-1 1 37078 bp Feature: gene Location: 1137217-1138098 bp Ori: QHD52726.1 Feature: domain Description: FimV_core Location: 1137886-1138084 bp Feature: domain Description: FimV_core Location: 1 1 37886-1 1 38084 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06302 (acetyl-CoA carboxylase biotin carboxyl carrier protein), YegP (COG3422), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), L31 (TIGR00105), FimV_core (TIGR03505)