myRT

myRT report for GCA_009858215.1_ASM985821v1

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Seq: CP047394.1 Bacillus vietnamensis strain 151-6 chromosome, complete genome (4556861 bp)
Overview 1 RT 1: 822395-826277 bp 2 RT 2: 1039443-1044012 bp 3 RT 3: 1673442-1679721 bp 4 RT 4: 3082208-3086763 bp 5 RT 5: 3357088-3364215 bp 6 RT 6: 3926838-3933838 bp Neighborhood of RT #1 [822395, 826282] APH RVT-GII GIIM PRK09415 Neighborhood of RT #2 [1039443, 1044020] MFS_YfcJ_like YdeE RVT-GII GIIM DUF2975 YozG Neighborhood of RT #3 [1673442, 1679738] SpoOE-like MarR RVT-GII GIIM M3B_PepF YkvI Neighborhood of RT #4 [3082208, 3086768] obgE SPOB_a SPOB_ab RVT-GII GIIM RpmA PRK14553 Neighborhood of RT #5 [3357088, 3364215] alaDH SLC-NCS1sbd_CobB-like RVT-UG14 Neighborhood of RT #6 [3926838, 3933849] RNase_R YvaK RVT-GII GIIM secG eno Feature: gene Location: 822395-822553 bp Feature: gene Location: 822556-823416 bp Ori: QHE60329.1 Feature: domain Description: APH Location: 822595-823135 bp Feature: domain Description: APH Location: 822595-8231 35 bp Feature: gene Location: 824012-825274 bp Ori: QHE60330.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 824210-824828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82421 0-824828 bp Feature: domain Description: GIIM Note: maturase Location: 824876-825083 bp Feature: domain Description: GIIM Note: maturase Location: 824876-825083 bp Feature: gene Location: 825340-825531 bp Feature: gene Location: 825767-826282 bp Ori: QHE63649.1 Feature: domain Description: PRK09415 Location: 825791-826277 bp Feature: domain Description: PRK0941 5 Location: 825791 -826277 bp Feature: gene Location: 1039443-1040636 bp Ori: QHE60562.1 Feature: domain Description: MFS_YfcJ_like Location: 1039491-1040598 bp Feature: domain Description: MFS_YfcJ_like Location: 1 039491 -1 040598 bp Feature: gene Location: 1040837-1041313 bp Ori: QHE60563.1 Feature: domain Description: YdeE Location: 1040843-1041296 bp Feature: domain Description: YdeE Location: 1 040843-1 041 296 bp Feature: gene Location: 1041883-1043145 bp Ori: QHE60564.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1042081-1042699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 042081 -1 042699 bp Feature: domain Description: GIIM Note: maturase Location: 1042747-1042954 bp Feature: domain Description: GIIM Note: maturase Location: 1 042747-1 042954 bp Feature: gene Location: 1043316-1043789 bp Ori: QHE60565.1 Feature: domain Description: DUF2975 Location: 1043415-1043787 bp Feature: domain Description: DUF2975 Location: 1 04341 5-1 043787 bp Feature: gene Location: 1043799-1044020 bp Ori: QHE60566.1 Feature: domain Description: YozG Location: 1043802-1044012 bp Feature: domain Description: YozG Location: 1 043802-1 04401 2 bp Feature: gene Location: 1673442-1673687 bp Ori: QHE61083.1 Feature: domain Description: SpoOE-like Location: 1673472-1673595 bp Feature: domain Description: SpoOE-like Location: 1 673472-1 673595 bp Feature: gene Location: 1673930-1674379 bp Ori: QHE61084.1 Feature: domain Description: MarR Location: 1673987-1674350 bp Feature: domain Description: MarR Location: 1 673987-1 674350 bp Feature: gene Location: 1674976-1676238 bp Ori: QHE61085.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1675174-1675792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6751 74-1 675792 bp Feature: domain Description: GIIM Note: maturase Location: 1675840-1676047 bp Feature: domain Description: GIIM Note: maturase Location: 1 675840-1 676047 bp Feature: gene Location: 1676414-1678108 bp Ori: QHE61086.1 Feature: domain Description: M3B_PepF Location: 1676447-1678070 bp Feature: domain Description: M3B_PepF Location: 1 676447-1 678070 bp Feature: gene Location: 1678707-1679738 bp Ori: QHE61087.1 Feature: domain Description: YkvI Location: 1678731-1679721 bp Feature: domain Description: YkvI Location: 1 678731 -1 679721 bp Feature: gene Location: 3082208-3083494 bp Ori: QHE62330.1 Gene: obgE Feature: domain Description: obgE Location: 3082211-3083489 bp Feature: domain Description: obgE Location: 308221 1 -3083489 bp Feature: gene Location: 3083531-3084061 bp Ori: QHE62331.1 Feature: domain Description: SPOB_a Location: 3083552-3083699 bp Feature: domain Description: SPOB_a Location: 3083552-3083699 bp Feature: domain Description: SPOB_ab Location: 3083711-3084029 bp Feature: domain Description: SPOB_ab Location: 308371 1 -3084029 bp Feature: gene Location: 3084264-3085526 bp Ori: QHE62332.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3084462-3085080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3084462-3085080 bp Feature: domain Description: GIIM Note: maturase Location: 3085128-3085335 bp Feature: domain Description: GIIM Note: maturase Location: 30851 28-3085335 bp Feature: gene Location: 3086130-3086420 bp Ori: QHE62333.1 Gene: rpmA Feature: domain Description: RpmA Location: 3086157-3086409 bp Feature: domain Description: RpmA Location: 30861 57-3086409 bp Feature: gene Location: 3086433-3086768 bp Ori: QHE62334.1 Feature: domain Description: PRK14553 Location: 3086436-3086763 bp Feature: domain Description: PRK1 4553 Location: 3086436-3086763 bp Feature: gene Location: 3357088-3358206 bp Ori: QHE62591.1 Gene: ald Feature: domain Description: alaDH Location: 3357091-3358189 bp Feature: domain Description: alaDH Location: 3357091 -33581 89 bp Feature: gene Location: 3358449-3359777 bp Ori: QHE62592.1 Feature: domain Description: SLC-NCS1sbd_CobB-like Location: 3358494-3359736 bp Feature: domain Description: SLC-NCS1 sbd_CobB-like Location: 3358494-3359736 bp Feature: gene Location: 3360477-3362030 bp Ori: QHE62593.1 Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 3360825-3361179 bp Feature: RT Description: RVT-UG1 4 Note: UG1 4 RT Location: 3360825-3361 1 79 bp Feature: gene Location: 3362696-3363085 bp Feature: gene Location: 3363409-3364215 bp Feature: gene Location: 3926838-3929180 bp Ori: QHE63085.1 Gene: rnr Feature: domain Description: RNase_R Location: 3926871-3928968 bp Feature: domain Description: RNase_R Location: 3926871 -3928968 bp Feature: gene Location: 3929208-3929954 bp Ori: QHE63086.1 Feature: domain Description: YvaK Location: 3929211-3929937 bp Feature: domain Description: YvaK Location: 392921 1 -3929937 bp Feature: gene Location: 3930309-3931571 bp Ori: QHE63087.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3930507-3931125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3930507-3931 1 25 bp Feature: domain Description: GIIM Note: maturase Location: 3931173-3931380 bp Feature: domain Description: GIIM Note: maturase Location: 3931 1 73-3931 380 bp Feature: gene Location: 3932166-3932393 bp Ori: QHE63088.1 Gene: secG Feature: domain Description: secG Location: 3932169-3932385 bp Feature: domain Description: secG Location: 39321 69-3932385 bp Feature: gene Location: 3932557-3933849 bp Ori: QHE63089.1 Feature: domain Description: eno Location: 3932569-3933838 bp Feature: domain Description: eno Location: 3932569-3933838 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT APH (pfam01636), RVT-GII, GIIM (pfam08388), PRK09415 (RNA polymerase factor sigma C; Reviewed), MFS_YfcJ_like (cd17489), YdeE (COG3708), DUF2975 (pfam11188), YozG (COG3655), SpoOE-like (pfam09388), MarR (pfam01047)
M3B_PepF (cd09610), YkvI (COG3949), obgE (PRK12299), SPOB_a (pfam14689), SPOB_ab (pfam14682), RpmA (COG0211), PRK14553 (ribosomal-processing cysteine protease Prp), alaDH (TIGR00518), SLC-NCS1sbd_CobB-like (cd11484), RVT-UG14
RNase_R (TIGR02063), YvaK (COG1647), secG (TIGR00810), eno (TIGR01060)