myRT

myRT report for GCA_009859475.1_ASM985947v1

Download annotations/find similar RTs

Seq: CP044549.1 Hydrogenophaga sp. BPS33 chromosome, complete genome (6325781 bp)
Overview 1 RT 1: 4369922-4377906 bp Neighborhood of RT #1 [4369922, 4377968] DLP_2 DLP_2 PRK01103 RVT_N RVT-GII GIIM HNHc TPR TPR TPR TPR LolB Feature: gene Location: 4369922-4371871 bp Ori: QHE87071.1 Feature: domain Description: DLP_2 Location: 4370087-4370225 bp Feature: domain Description: DLP_2 Location: 4370087-4370225 bp Feature: domain Description: DLP_2 Location: 4370495-4370945 bp Feature: domain Description: DLP_2 Location: 4370495-4370945 bp Feature: gene Location: 4371975-4372790 bp Ori: QHE87072.1 Gene: mutM Feature: domain Description: PRK01103 Location: 4371978-4372785 bp Feature: domain Description: PRK01 1 03 Location: 4371 978-4372785 bp Feature: gene Location: 4373869-4375575 bp Ori: QHE87073.1 Gene: ltrA Feature: domain Description: RVT_N Location: 4373926-4374169 bp Feature: domain Description: RVT_N Location: 4373926-43741 69 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4374214-4374862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 437421 4-4374862 bp Feature: domain Description: GIIM Note: maturase Location: 4374913-4375147 bp Feature: domain Description: GIIM Note: maturase Location: 437491 3-43751 47 bp Feature: domain Description: HNHc Note: nucleases Location: 4375357-4375528 bp Feature: domain Description: HNHc Note: nucleases Location: 4375357-4375528 bp Feature: gene Location: 4375747-4377471 bp Ori: QHE88960.1 Feature: domain Description: TPR Location: 4376392-4376665 bp Feature: domain Description: TPR Location: 4376392-4376665 bp Feature: domain Description: TPR Location: 4376719-4376923 bp Feature: domain Description: TPR Location: 437671 9-4376923 bp Feature: domain Description: TPR Location: 4376935-4377157 bp Feature: domain Description: TPR Location: 4376935-43771 57 bp Feature: domain Description: TPR Location: 4377172-4377409 bp Feature: domain Description: TPR Location: 43771 72-4377409 bp Feature: gene Location: 4377471-4377968 bp Ori: QHE88961.1 Feature: domain Description: LolB Location: 4377585-4377906 bp Feature: domain Description: LolB Location: 4377585-4377906 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DLP_2 (cd09912), PRK01103 (bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), TPR (smart00028), LolB (pfam03550)