myRT

myRT report for GCA_009866765.1_ASM986676v1

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Seq: CP019431.1 Pseudomonas sp. S35 chromosome, complete genome (6611402 bp)
Overview 1 RT 1: 2124570-2129962 bp 2 RT 2: 4386245-4393240 bp 3 RT 3: 4743739-4749450 bp Neighborhood of RT #1 [2124570, 2129988] conj_PilL SF2_C_SNF RVT_N RVT-GII GIIM HNHc DEXHc_Snf DEXHc_Snf Neighborhood of RT #2 [4386245, 4393242] MFS_LmrB_MDR_like KOG4280 RVT-GII GIIM DadA PRK05717 Neighborhood of RT #3 [4743739, 4749450] INT_tnpB_C_Tn554 RVT-Retrons Feature: gene Location: 2124570-2125154 bp Ori: QHF44078.1 Feature: domain Description: conj_PilL Location: 2124753-2125062 bp Feature: domain Description: conj_PilL Location: 21 24753-21 25062 bp Feature: gene Location: 2125294-2126373 bp Feature: domain Description: SF2_C_SNF Location: 2125810-2126209 bp Feature: domain Description: SF2_C_SNF Location: 21 2581 0-21 26209 bp Feature: gene Location: 2126456-2128159 bp Ori: QHF47928.1 Feature: domain Description: RVT_N Location: 2126513-2126756 bp Feature: domain Description: RVT_N Location: 21 2651 3-21 26756 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2126801-2127437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 26801 -21 27437 bp Feature: domain Description: GIIM Note: maturase Location: 2127491-2127722 bp Feature: domain Description: GIIM Note: maturase Location: 21 27491 -21 27722 bp Feature: domain Description: HNHc Note: nucleases Location: 2127956-2128112 bp Feature: domain Description: HNHc Note: nucleases Location: 21 27956-21 281 1 2 bp Feature: gene Location: 2128156-2128433 bp Feature: gene Location: 2128777-2129988 bp Feature: domain Description: DEXHc_Snf Location: 2128996-2129254 bp Feature: domain Description: DEXHc_Snf Location: 21 28996-21 29254 bp Feature: domain Description: DEXHc_Snf Location: 2129830-2129962 bp Feature: domain Description: DEXHc_Snf Location: 21 29830-21 29962 bp Feature: gene Location: 4386245-4387666 bp Ori: QHF45901.1 Feature: domain Description: MFS_LmrB_MDR_like Location: 4386314-4387619 bp Feature: domain Description: MFS_LmrB_MDR_like Location: 438631 4-438761 9 bp Feature: gene Location: 4387696-4388133 bp Ori: QHF45902.1 Feature: domain Description: KOG4280 Location: 4387822-4388014 bp Feature: domain Description: KOG4280 Location: 4387822-438801 4 bp Feature: gene Location: 4388375-4389796 bp Ori: QHF45903.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4388732-4389347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4388732-4389347 bp Feature: domain Description: GIIM Note: maturase Location: 4389401-4389617 bp Feature: domain Description: GIIM Note: maturase Location: 4389401 -438961 7 bp Feature: gene Location: 4390547-4391830 bp Ori: QHF45904.1 Feature: domain Description: DadA Location: 4390634-4391765 bp Feature: domain Description: DadA Location: 4390634-4391 765 bp Feature: gene Location: 4392478-4393242 bp Ori: QHF45905.1 Feature: domain Description: PRK05717 Location: 4392484-4393240 bp Feature: domain Description: PRK0571 7 Location: 4392484-4393240 bp Feature: gene Location: 4743739-4745739 bp Ori: QHF46211.1 Feature: domain Description: INT_tnpB_C_Tn554 Location: 4744714-4745254 bp Feature: domain Description: INT_tnpB_C_Tn554 Location: 474471 4-4745254 bp Feature: gene Location: 4745765-4746208 bp Feature: gene Location: 4746482-4747600 bp Ori: QHF46213.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4746620-4747187 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4746620-47471 87 bp Feature: gene Location: 4747673-4747927 bp Feature: gene Location: 4748620-4749450 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT conj_PilL (TIGR03748), SF2_C_SNF (cd18793), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DEXHc_Snf (cd17919), MFS_LmrB_MDR_like (cd17503), KOG4280 (KOG4280, Kinesin-like protein ), DadA (COG0665)
PRK05717 (SDR family oxidoreductase), INT_tnpB_C_Tn554 (cd01187), RVT-Retrons