myRT

myRT report for GCA_009866925.1_ASM986692v1

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Seq: CP026930.1 Escherichia coli strain CFS3246 plasmid pCFS3246-1, complete sequence (129225 bp)
Overview 1 RT 1: 22003-25872 bp Neighborhood of RT #1 [22003, 26204] PHA02517 RVT-GII GIIM PHA02517 COG4584 Feature: gene Location: 22003-22428 bp Feature: domain Description: PHA02517 Location: 22093-22429 bp Feature: domain Description: PHA0251 7 Location: 22093-22429 bp Feature: gene Location: 22361-22792 bp Feature: gene Location: 23085-24608 bp Ori: QHF70772.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23358-24090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23358-24090 bp Feature: domain Description: GIIM Note: maturase Location: 24165-24363 bp Feature: domain Description: GIIM Note: maturase Location: 241 65-24363 bp Feature: gene Location: 24689-25156 bp Feature: domain Description: PHA02517 Location: 24692-25151 bp Feature: domain Description: PHA0251 7 Location: 24692-251 51 bp Feature: gene Location: 25191-26204 bp Feature: domain Description: COG4584 Location: 25197-25872 bp Feature: domain Description: COG4584 Location: 251 97-25872 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG4584 (Transposase )

Seq: CP026929.1 Escherichia coli strain CFS3246 chromosome, complete genome (4803456 bp)
Overview 1 RT 1: 120408-124287 bp 2 RT 2: 853507-856873 bp 3 RT 3: 4210597-4214440 bp Neighborhood of RT #1 [120408, 124292] rph pyrE RVT-Retrons slmA dut Neighborhood of RT #2 [853507, 856872] PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #3 [4210597, 4214440] LacI PBP1_GntR RVT-GII GIIM RVT-GII Feature: gene Location: 120408-121124 bp Ori: QHF66279.1 Feature: domain Description: rph Location: 120411-121119 bp Feature: domain Description: rph Location: 12 0411-12 1119 bp Feature: gene Location: 121190-121831 bp Ori: QHF66280.1 Feature: domain Description: pyrE Location: 121193-121826 bp Feature: domain Description: pyrE Location: 12 1193-12 182 6 bp Feature: gene Location: 122129-123088 bp Ori: QHF66281.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 122264-122813 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 2 2 64-12 2 813 bp Feature: gene Location: 123134-123730 bp Ori: QHF66282.1 Feature: domain Description: slmA Location: 123140-123716 bp Feature: domain Description: slmA Location: 12 3140-12 3716 bp Feature: gene Location: 123837-124292 bp Ori: QHF70551.1 Feature: domain Description: dut Location: 123840-124287 bp Feature: domain Description: dut Location: 12 3840-12 42 87 bp Feature: gene Location: 853507-853737 bp Feature: gene Location: 853703-854176 bp Feature: domain Description: PHA02517 Location: 853709-854174 bp Feature: domain Description: PHA02 517 Location: 853709-854174 bp Feature: gene Location: 854266-855789 bp Ori: QHF66972.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 854539-855271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 854539-8552 71 bp Feature: domain Description: GIIM Note: maturase Location: 855346-855544 bp Feature: domain Description: GIIM Note: maturase Location: 855346-855544 bp Feature: gene Location: 856083-856514 bp Feature: gene Location: 856447-856872 bp Feature: domain Description: PHA02517 Location: 856537-856873 bp Feature: domain Description: PHA02 517 Location: 856537-856873 bp Feature: gene Location: 4210597-4211628 bp Ori: QHF70028.1 Feature: domain Description: LacI Location: 4210639-4210774 bp Feature: domain Description: LacI Location: 42 10639-42 10774 bp Feature: domain Description: PBP1_GntR Location: 4210813-4211623 bp Feature: domain Description: PBP1_GntR Location: 42 10813-42 1162 3 bp Feature: gene Location: 4211756-4212079 bp Feature: gene Location: 4212155-4212961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4212158-4212521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 12 158-42 12 52 1 bp Feature: domain Description: GIIM Note: maturase Location: 4212569-4212791 bp Feature: domain Description: GIIM Note: maturase Location: 42 12 569-42 12 791 bp Feature: gene Location: 4212979-4213413 bp Ori: QHF70029.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4213171-4213387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 13171-42 13387 bp Feature: gene Location: 4213799-4214020 bp Feature: gene Location: 4214177-4214440 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), LacI (pfam00356), PBP1_GntR (cd01575)