myRT

myRT report for GCA_009867035.1_ASM986703v1

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Seq: CP026939.1 Escherichia coli strain CFS3313 chromosome, complete genome (4936627 bp)
Overview 1 RT 1: 1907473-1913952 bp 2 RT 2: 1919892-1927125 bp Neighborhood of RT #1 [1907473, 1913954] GMP_PMI PRK15414 RVT_N RVT-GII GIIM HNHc PRK15057 Neighborhood of RT #2 [1919892, 1927145] GMP_PMI PRK15414 RVT_N RVT-GII GIIM HNHc TagG TagH Wzt_C-like Feature: gene Location: 1907473-1908888 bp Ori: QHF83446.1 Feature: domain Description: GMP_PMI Location: 1907479-1908883 bp Feature: domain Description: GMP_PMI Location: 1 907479-1 908883 bp Feature: gene Location: 1908912-1910227 bp Feature: domain Description: PRK15414 Location: 1908915-1909050 bp Feature: domain Description: PRK1 541 4 Location: 1 90891 5-1 909050 bp Feature: gene Location: 1910801-1912468 bp Ori: QHF83447.1 Gene: ltrA Feature: domain Description: RVT_N Location: 1910849-1911086 bp Feature: domain Description: RVT_N Location: 1 91 0849-1 91 1 086 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1911137-1911779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 91 1 1 37-1 91 1 779 bp Feature: domain Description: GIIM Note: maturase Location: 1911830-1912064 bp Feature: domain Description: GIIM Note: maturase Location: 1 91 1 830-1 91 2064 bp Feature: domain Description: HNHc Note: nucleases Location: 1912274-1912433 bp Feature: domain Description: HNHc Note: nucleases Location: 1 91 2274-1 91 2433 bp Feature: gene Location: 1912550-1912624 bp Feature: gene Location: 1912788-1913954 bp Ori: QHF83448.1 Feature: domain Description: PRK15057 Location: 1912791-1913952 bp Feature: domain Description: PRK1 5057 Location: 1 91 2791 -1 91 3952 bp Feature: gene Location: 1919892-1921307 bp Ori: QHF83452.1 Feature: domain Description: GMP_PMI Location: 1919898-1921302 bp Feature: domain Description: GMP_PMI Location: 1 91 9898-1 921 302 bp Feature: gene Location: 1921331-1922647 bp Ori: QHF83453.1 Feature: domain Description: PRK15414 Location: 1921334-1922639 bp Feature: domain Description: PRK1 541 4 Location: 1 921 334-1 922639 bp Feature: gene Location: 1923221-1924888 bp Ori: QHF83454.1 Gene: ltrA Feature: domain Description: RVT_N Location: 1923269-1923506 bp Feature: domain Description: RVT_N Location: 1 923269-1 923506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1923557-1924199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 923557-1 9241 99 bp Feature: domain Description: GIIM Note: maturase Location: 1924250-1924484 bp Feature: domain Description: GIIM Note: maturase Location: 1 924250-1 924484 bp Feature: domain Description: HNHc Note: nucleases Location: 1924694-1924853 bp Feature: domain Description: HNHc Note: nucleases Location: 1 924694-1 924853 bp Feature: gene Location: 1925062-1925847 bp Ori: QHF83455.1 Feature: domain Description: TagG Location: 1925071-1925842 bp Feature: domain Description: TagG Location: 1 925071 -1 925842 bp Feature: gene Location: 1925850-1927145 bp Ori: QHF83456.1 Feature: domain Description: TagH Location: 1925853-1926567 bp Feature: domain Description: TagH Location: 1 925853-1 926567 bp Feature: domain Description: Wzt_C-like Location: 1926699-1927125 bp Feature: domain Description: Wzt_C-like Location: 1 926699-1 9271 25 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GMP_PMI (TIGR01479), PRK15414 (phosphomannomutase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK15057 (UDP-glucose 6-dehydrogenase; Provisional), TagG (COG1682), TagH (COG1134), Wzt_C-like (cl15685)

Seq: CP026941.1 Escherichia coli strain CFS3313 plasmid pCFS3313-2, complete sequence (111813 bp)
Overview 1 RT 1: 41261-44920 bp Neighborhood of RT #1 [41261, 44922] RVT_N RVT-GII GIIM HNHc PRK13732 Feature: gene Location: 41261-41356 bp Feature: gene Location: 41397-41582 bp Feature: gene Location: 41560-43227 bp Ori: QHF86640.1 Gene: ltrA Feature: domain Description: RVT_N Location: 41608-41845 bp Feature: domain Description: RVT_N Location: 41608-41845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41896-42538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41896-42 538 bp Feature: domain Description: GIIM Note: maturase Location: 42589-42823 bp Feature: domain Description: GIIM Note: maturase Location: 42 589-42 82 3 bp Feature: domain Description: HNHc Note: nucleases Location: 43033-43192 bp Feature: domain Description: HNHc Note: nucleases Location: 43033-43192 bp Feature: gene Location: 44000-44385 bp Feature: gene Location: 44395-44922 bp Ori: QHF86641.1 Feature: domain Description: PRK13732 Location: 44398-44920 bp Feature: domain Description: PRK13732 Location: 44398-4492 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional)