myRT

myRT report for GCA_009867115.1_ASM986711v1

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Seq: CP037929.1 Klebsiella pneumoniae subsp. pneumoniae strain KP-8788 plasmid pKPN-IT-8788, complete sequence (271781 bp)
Overview 1 RT 1: 221807-224888 bp Neighborhood of RT #1 [221807, 224902] DUF1472 RVT-GII PRK10276 Feature: gene Location: 221807-221899 bp Feature: domain Description: DUF1472 Location: 221819-221885 bp Feature: domain Description: DUF1 472 Location: 221 81 9-221 885 bp Feature: gene Location: 222123-222353 bp Feature: gene Location: 222587-224071 bp Ori: QHG08031.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 222989-223679 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 222989-223679 bp Feature: gene Location: 224071-224322 bp Feature: gene Location: 224477-224902 bp Ori: QHG08033.1 Gene: umuD Feature: domain Description: PRK10276 Location: 224480-224888 bp Feature: domain Description: PRK1 0276 Location: 224480-224888 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1472 (pfam07339), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP037928.1 Klebsiella pneumoniae subsp. pneumoniae strain KP-8788 chromosome, complete genome (5389402 bp)
Overview 1 RT 1: 1857033-1861905 bp 2 RT 2: 3100565-3104703 bp 3 RT 3: 3286840-3290939 bp 4 RT 4: 3621869-3625307 bp Neighborhood of RT #1 [1857033, 1861919] dacD RVT-GII PRK10016 YccC Neighborhood of RT #2 [3100565, 3104703] umuC PRK10276 RVT-GII Neighborhood of RT #3 [3286840, 3290950] umuC PRK10276 RVT-GII DinI Neighborhood of RT #4 [3621869, 3625357] DinI RVT-GII int Feature: gene Location: 1857033-1858202 bp Ori: QHG04340.1 Gene: dacD Feature: domain Description: dacD Location: 1857042-1858197 bp Feature: domain Description: dacD Location: 1857042 -1858197 bp Feature: gene Location: 1858472-1858723 bp Feature: gene Location: 1858723-1860207 bp Ori: QHG04342.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1859125-1859815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 185912 5-1859815 bp Feature: gene Location: 1860289-1860762 bp Ori: QHG04343.1 Gene: sbmC Feature: domain Description: PRK10016 Location: 1860292-1860751 bp Feature: domain Description: PRK10016 Location: 18602 92 -1860751 bp Feature: gene Location: 1860861-1861919 bp Ori: QHG04344.1 Feature: domain Description: YccC Location: 1860867-1861905 bp Feature: domain Description: YccC Location: 1860867-1861905 bp Feature: gene Location: 3100565-3101830 bp Ori: QHG05517.1 Gene: umuC Feature: domain Description: umuC Location: 3100568-3101828 bp Feature: domain Description: umuC Location: 3100568-310182 8 bp Feature: gene Location: 3101832-3102251 bp Ori: QHG05518.1 Gene: umuD Feature: domain Description: PRK10276 Location: 3101835-3102246 bp Feature: domain Description: PRK102 76 Location: 3101835-3102 2 46 bp Feature: gene Location: 3102331-3103815 bp Ori: QHG05519.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3102733-3103423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3102 733-310342 3 bp Feature: gene Location: 3103815-3104066 bp Feature: gene Location: 3104614-3104703 bp Feature: gene Location: 3286840-3288105 bp Ori: QHG05708.1 Gene: umuC Feature: domain Description: umuC Location: 3286843-3288103 bp Feature: domain Description: umuC Location: 32 86843-32 88103 bp Feature: gene Location: 3288108-3288527 bp Ori: QHG05709.1 Gene: umuD Feature: domain Description: PRK10276 Location: 3288111-3288522 bp Feature: domain Description: PRK102 76 Location: 32 88111-32 8852 2 bp Feature: gene Location: 3288606-3290090 bp Ori: QHG05710.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3289008-3289698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 89008-32 89698 bp Feature: gene Location: 3290090-3290341 bp Feature: gene Location: 3290708-3290950 bp Ori: QHG05712.1 Feature: domain Description: DinI Location: 3290759-3290939 bp Feature: domain Description: DinI Location: 32 90759-32 90939 bp Feature: gene Location: 3621869-3622174 bp Ori: QHG06012.1 Feature: domain Description: DinI Location: 3621983-3622169 bp Feature: domain Description: DinI Location: 362 1983-362 2 169 bp Feature: gene Location: 3622113-3622301 bp Feature: gene Location: 3622402-3623886 bp Ori: QHG06013.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3622804-3623494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 362 2 804-362 3494 bp Feature: gene Location: 3623886-3624137 bp Feature: gene Location: 3624305-3625357 bp Ori: QHG06015.1 Feature: domain Description: int Location: 3624308-3625307 bp Feature: domain Description: int Location: 362 4308-362 5307 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), DinI (pfam06183), int (PHA02601)