myRT

myRT report for GCA_009873375.1_ASM987337v1

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Seq: CP041749.1 Escherichia coli strain NCCP 15955 chromosome, complete genome (4820620 bp)
Overview 1 RT 1: 1536074-1539998 bp 2 RT 2: 2837670-2842950 bp Neighborhood of RT #1 [1536074, 1540030] InsE RVT-GII GIIM InsE TnpB_IS66 Neighborhood of RT #2 [2837670, 2842955] LldP PHA02517 RVT-GII GIIM InsG YkfC Feature: gene Location: 1536074-1536813 bp Feature: domain Description: InsE Location: 1536077-1536398 bp Feature: domain Description: InsE Location: 1 536077-1 536398 bp Feature: gene Location: 1536806-1537177 bp Feature: gene Location: 1537486-1538994 bp Ori: QHG41943.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1537744-1538476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 537744-1 538476 bp Feature: domain Description: GIIM Note: maturase Location: 1538551-1538749 bp Feature: domain Description: GIIM Note: maturase Location: 1 538551 -1 538749 bp Feature: gene Location: 1539258-1539683 bp Ori: QHG39108.1 Feature: domain Description: InsE Location: 1539291-1539663 bp Feature: domain Description: InsE Location: 1 539291 -1 539663 bp Feature: gene Location: 1539680-1540030 bp Ori: QHG39109.1 Gene: tnpB Feature: domain Description: TnpB_IS66 Location: 1539707-1539998 bp Feature: domain Description: TnpB_IS66 Location: 1 539707-1 539998 bp Feature: gene Location: 2837670-2839226 bp Ori: QHG40168.1 Feature: domain Description: LldP Location: 2837682-2839218 bp Feature: domain Description: LldP Location: 2837682-283921 8 bp Feature: gene Location: 2839513-2840001 bp Feature: domain Description: PHA02517 Location: 2839516-2839981 bp Feature: domain Description: PHA0251 7 Location: 283951 6-2839981 bp Feature: gene Location: 2840082-2841464 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2840214-2840946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 284021 4-2840946 bp Feature: domain Description: GIIM Note: maturase Location: 2841021-2841219 bp Feature: domain Description: GIIM Note: maturase Location: 2841 021 -2841 21 9 bp Feature: gene Location: 2841637-2842749 bp Ori: QHG40169.1 Feature: domain Description: InsG Location: 2841640-2842678 bp Feature: domain Description: InsG Location: 2841 640-2842678 bp Feature: gene Location: 2842800-2842955 bp Ori: QHG40170.1 Feature: domain Description: YkfC Location: 2842809-2842950 bp Feature: domain Description: YkfC Location: 2842809-2842950 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, GIIM (pfam08388), TnpB_IS66 (pfam05717), LldP (COG1620), PHA02517 (putative transposase OrfB; Reviewed), InsG (COG3385), YkfC (COG3344)