myRT

myRT report for GCA_009873395.1_ASM987339v1

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Seq: CP041752.1 Bacillus paranthracis strain NCCP 14796 plasmid unnamed2, complete sequence (40613 bp)
Overview 1 RT 1: 7733-11798 bp Neighborhood of RT #1 [7733, 11809] nuc_hydro RVT_N RVT-GII GIIM NlpD Feature: gene Location: 7733-8683 bp Ori: QHG37733.1 Feature: domain Description: nuc_hydro Location: 7748-8654 bp Feature: domain Description: nuc_hydro Location: 7748-8654 bp Feature: gene Location: 9135-9314 bp Feature: gene Location: 9403-11049 bp Ori: QHG37735.1 Gene: ltrA Feature: domain Description: RVT_N Location: 9445-9682 bp Feature: domain Description: RVT_N Location: 9445-9682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9736-10396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9736-1 0396 bp Feature: domain Description: GIIM Note: maturase Location: 10465-10696 bp Feature: domain Description: GIIM Note: maturase Location: 1 0465-1 0696 bp Feature: gene Location: 11065-11154 bp Feature: gene Location: 11243-11809 bp Ori: QHG37736.1 Feature: domain Description: NlpD Location: 11447-11798 bp Feature: domain Description: NlpD Location: 1 1 447-1 1 798 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT nuc_hydro (cl00226), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), NlpD (COG0739)

Seq: CP041750.1 Bacillus paranthracis strain NCCP 14796 chromosome, complete genome (5017580 bp)
Overview 1 RT 1: 902656-907397 bp 2 RT 2: 940385-948393 bp 3 RT 3: 1695480-1701676 bp 4 RT 4: 3139420-3143752 bp 5 RT 5: 3210607-3215740 bp 6 RT 6: 3462828-3475283 bp 7 RT 7: 3808008-3813167 bp Neighborhood of RT #1 [902656, 907408] metallo-hydrolase-like_MBL-fold RVT-GII HNHc TTHA1623-like_MBL-fold HxlR Neighborhood of RT #2 [940385, 948393] PRK06187 Big_8 RVT-GII HNHc Collagen_bind SpaA CollagenBindB Neighborhood of RT #3 [1695480, 1701681] asn_synth_AEB RVT-GII HNHc AsnB PRK06811 Neighborhood of RT #4 [3139420, 3143796] HTH_3 RVT_N RVT-GII GIIM GrpB Neighborhood of RT #5 [3210607, 3215775] stp RVT_N RVT-GII GIIM IDEAL Neighborhood of RT #6 [3462828, 3475318] B_ant_repeat RVT-GII HNHc B_ant_repeat B_ant_repeat B_ant_repeat CcdC Neighborhood of RT #7 [3808008, 3813223] YugN amiF RVT-GII HNHc amiF caa3_CtaG Feature: gene Location: 902656-902903 bp Feature: gene Location: 903110-903217 bp Feature: domain Description: metallo-hydrolase-like_MBL-fold Location: 903125-903212 bp Feature: domain Description: metallo-hydrolase-like_MBL-fold Location: 90312 5-9032 12 bp Feature: gene Location: 903939-905771 bp Ori: QHG33787.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 904239-904944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9042 39-904944 bp Feature: domain Description: HNHc Note: nucleases Location: 905523-905655 bp Feature: domain Description: HNHc Note: nucleases Location: 90552 3-905655 bp Feature: gene Location: 905888-906424 bp Feature: domain Description: TTHA1623-like_MBL-fold Location: 905897-906410 bp Feature: domain Description: TTHA162 3-like_MBL-fold Location: 905897-906410 bp Feature: gene Location: 907064-907408 bp Ori: QHG33788.1 Feature: domain Description: HxlR Location: 907115-907397 bp Feature: domain Description: HxlR Location: 907115-907397 bp Feature: gene Location: 940385-941941 bp Ori: QHG33819.1 Feature: domain Description: PRK06187 Location: 940388-941930 bp Feature: domain Description: PRK06187 Location: 940388-941930 bp Feature: gene Location: 942555-943065 bp Feature: domain Description: Big_8 Location: 942705-942954 bp Feature: domain Description: Big_8 Location: 942 705-942 954 bp Feature: gene Location: 943781-945613 bp Ori: QHG33820.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 944081-944786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 944081-944786 bp Feature: domain Description: HNHc Note: nucleases Location: 945365-945497 bp Feature: domain Description: HNHc Note: nucleases Location: 945365-945497 bp Feature: gene Location: 945792-947874 bp Feature: domain Description: Collagen_bind Location: 945795-946107 bp Feature: domain Description: Collagen_bind Location: 945795-946107 bp Feature: domain Description: SpaA Location: 946245-946446 bp Feature: domain Description: SpaA Location: 9462 45-946446 bp Feature: domain Description: CollagenBindB Location: 946494-946740 bp Feature: domain Description: CollagenBindB Location: 946494-946740 bp Feature: gene Location: 947929-948393 bp Feature: gene Location: 1695480-1696306 bp Feature: gene Location: 1696349-1698031 bp Ori: QHG34541.1 Gene: asnB Feature: domain Description: asn_synth_AEB Location: 1696379-1697807 bp Feature: domain Description: asn_synth_AEB Location: 1696379-1697807 bp Feature: gene Location: 1698112-1699944 bp Ori: QHG34542.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1698412-1699117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1698412 -1699117 bp Feature: domain Description: HNHc Note: nucleases Location: 1699696-1699828 bp Feature: domain Description: HNHc Note: nucleases Location: 1699696-169982 8 bp Feature: gene Location: 1700660-1700857 bp Ori: QHG34543.1 Feature: domain Description: AsnB Location: 1700669-1700846 bp Feature: domain Description: AsnB Location: 1700669-1700846 bp Feature: gene Location: 1701115-1701681 bp Ori: QHG34544.1 Feature: domain Description: PRK06811 Location: 1701118-1701676 bp Feature: domain Description: PRK06811 Location: 1701118-1701676 bp Feature: gene Location: 3139420-3140543 bp Feature: domain Description: HTH_3 Location: 3139450-3139612 bp Feature: domain Description: HTH_3 Location: 3139450-3139612 bp Feature: gene Location: 3140798-3140887 bp Feature: gene Location: 3140903-3142549 bp Ori: QHG35795.1 Gene: ltrA Feature: domain Description: RVT_N Location: 3140945-3141182 bp Feature: domain Description: RVT_N Location: 3140945-3141182 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3141236-3141896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31412 36-3141896 bp Feature: domain Description: GIIM Note: maturase Location: 3141965-3142196 bp Feature: domain Description: GIIM Note: maturase Location: 3141965-3142 196 bp Feature: gene Location: 3142638-3142817 bp Feature: gene Location: 3143266-3143796 bp Ori: QHG35797.1 Feature: domain Description: GrpB Location: 3143278-3143752 bp Feature: domain Description: GrpB Location: 31432 78-3143752 bp Feature: gene Location: 3210607-3211926 bp Ori: QHG35864.1 Feature: domain Description: stp Location: 3210694-3211894 bp Feature: domain Description: stp Location: 32 10694-32 11894 bp Feature: gene Location: 3212894-3212983 bp Feature: gene Location: 3212999-3214645 bp Ori: QHG35865.1 Gene: ltrA Feature: domain Description: RVT_N Location: 3213041-3213278 bp Feature: domain Description: RVT_N Location: 32 13041-32 132 78 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3213332-3213992 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 13332 -32 13992 bp Feature: domain Description: GIIM Note: maturase Location: 3214061-3214292 bp Feature: domain Description: GIIM Note: maturase Location: 32 14061-32 142 92 bp Feature: gene Location: 3214734-3214913 bp Feature: gene Location: 3215440-3215775 bp Ori: QHG35867.1 Feature: domain Description: IDEAL Location: 3215644-3215740 bp Feature: domain Description: IDEAL Location: 32 15644-32 15740 bp Feature: gene Location: 3462828-3463907 bp Feature: gene Location: 3464176-3470657 bp Feature: domain Description: B_ant_repeat Location: 3464185-3464323 bp Feature: domain Description: B_ant_repeat Location: 3464185-346432 3 bp Feature: gene Location: 3470838-3472766 bp Ori: QHG36085.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3471159-3471894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3471159-3471894 bp Feature: domain Description: HNHc Note: nucleases Location: 3472485-3472650 bp Feature: domain Description: HNHc Note: nucleases Location: 3472 485-3472 650 bp Feature: gene Location: 3473459-3474748 bp Ori: QHG36086.1 Feature: domain Description: B_ant_repeat Location: 3473546-3473657 bp Feature: domain Description: B_ant_repeat Location: 3473546-3473657 bp Feature: domain Description: B_ant_repeat Location: 3473897-3474053 bp Feature: domain Description: B_ant_repeat Location: 3473897-3474053 bp Feature: domain Description: B_ant_repeat Location: 3474296-3474452 bp Feature: domain Description: B_ant_repeat Location: 34742 96-3474452 bp Feature: gene Location: 3474812-3475318 bp Ori: QHG36087.1 Feature: domain Description: CcdC Location: 3474821-3475283 bp Feature: domain Description: CcdC Location: 347482 1-34752 83 bp Feature: gene Location: 3808008-3808367 bp Ori: QHG36397.1 Feature: domain Description: YugN Location: 3808023-3808269 bp Feature: domain Description: YugN Location: 380802 3-38082 69 bp Feature: gene Location: 3808414-3809037 bp Feature: domain Description: amiF Location: 3808417-3809032 bp Feature: domain Description: amiF Location: 3808417-3809032 bp Feature: gene Location: 3809154-3810986 bp Ori: QHG36398.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3809454-3810159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3809454-3810159 bp Feature: domain Description: HNHc Note: nucleases Location: 3810738-3810870 bp Feature: domain Description: HNHc Note: nucleases Location: 3810738-3810870 bp Feature: gene Location: 3811720-3812091 bp Gene: amiF Feature: domain Description: amiF Location: 3811723-3812092 bp Feature: domain Description: amiF Location: 381172 3-3812 092 bp Feature: gene Location: 3812318-3813223 bp Ori: QHG36399.1 Gene: ctaG Feature: domain Description: caa3_CtaG Location: 3812327-3813167 bp Feature: domain Description: caa3_CtaG Location: 3812 32 7-3813167 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT metallo-hydrolase-like_MBL-fold (cl23716), RVT-GII, HNHc (smart00507), TTHA1623-like_MBL-fold (cd16322), HxlR (pfam01638), PRK06187 (long-chain-fatty-acid--CoA ligase; Validated), Big_8 (pfam17961), Collagen_bind (pfam05737), SpaA (pfam17802), CollagenBindB (cl15753)
asn_synth_AEB (TIGR01536), AsnB (COG0367), PRK06811 (RNA polymerase factor sigma-70; Validated), HTH_3 (pfam01381), RVT_N (pfam13655), GIIM (pfam08388), GrpB (pfam04229), stp (TIGR00814), IDEAL (smart00914), B_ant_repeat (TIGR01451)
CcdC (COG4846), YugN (pfam08868), amiF (PRK13287), caa3_CtaG (TIGR02737)