myRT

myRT report for GCA_009884415.1_ASM988441v1

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Seq: CP045674.1 Klebsiella pneumoniae strain WSD411 chromosome, complete genome (5345246 bp)
Overview 1 RT 1: 789501-795226 bp Neighborhood of RT #1 [789501, 795444] FimC FimD RVT-UG4 Integrase_1 Feature: gene Location: 789501-790229 bp Feature: domain Description: FimC Location: 789549-790212 bp Feature: domain Description: FimC Location: 789549-79021 2 bp Feature: gene Location: 790261-792870 bp Feature: domain Description: FimD Location: 790318-792859 bp Feature: domain Description: FimD Location: 79031 8-792859 bp Feature: gene Location: 792870-794111 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 793278-793722 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 793278-793722 bp Feature: gene Location: 794108-794947 bp Feature: gene Location: 795004-795444 bp Feature: domain Description: Integrase_1 Location: 795010-795226 bp Feature: domain Description: Integrase_1 Location: 79501 0-795226 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835)

Seq: CP045677.1 Klebsiella pneumoniae strain WSD411 plasmid pWSD411_4, complete sequence (128536 bp)
Overview 1 RT 1: 26214-30879 bp Neighborhood of RT #1 [26214, 30879] PRK15417 Arr-ms RVT-GII GIIM N6_acetyl_AAC6 Feature: gene Location: 26214-27227 bp Feature: domain Description: PRK15417 Location: 26217-27225 bp Feature: domain Description: PRK15417 Location: 2 62 17-2 72 2 5 bp Feature: gene Location: 27226-27852 bp Feature: domain Description: Arr-ms Location: 27460-27766 bp Feature: domain Description: Arr-ms Location: 2 7460-2 7766 bp Feature: gene Location: 27933-29288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28227-28851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 82 2 7-2 8851 bp Feature: domain Description: GIIM Note: maturase Location: 28890-29109 bp Feature: domain Description: GIIM Note: maturase Location: 2 8890-2 9109 bp Feature: gene Location: 29907-30461 bp Feature: domain Description: N6_acetyl_AAC6 Location: 29910-30459 bp Feature: domain Description: N6_acetyl_AAC6 Location: 2 9910-30459 bp Feature: gene Location: 30451-30879 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15417 (integron integrase), Arr-ms (pfam12120), RVT-GII, GIIM (pfam08388), N6_acetyl_AAC6 (TIGR04431)