myRT

myRT report for GCA_009905195.1_ASM990519v1

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Seq: CP047592.1 Pseudomonas aeruginosa strain INP-43 chromosome, complete genome (6335031 bp)
Overview 1 RT 1: 724734-731129 bp 2 RT 2: 5652964-5660737 bp Neighborhood of RT #1 [724734, 731152] ABC_ATPase RVT-Retrons RfbB rmlD Neighborhood of RT #2 [5652964, 5660737] AdoMet_MTases DEXHc_Snf RVT_N RVT-GII GIIM HNHc KOG0387 SF2_C_SNF Feature: gene Location: 724734-725702 bp Feature: gene Location: 725872-727212 bp Ori: QHI62751.1 Feature: domain Description: ABC_ATPase Location: 725905-726640 bp Feature: domain Description: ABC_ATPase Location: 725905-726640 bp Feature: gene Location: 727209-728165 bp Ori: QHI62752.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 727332-727878 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 727332-727878 bp Feature: gene Location: 729189-730247 bp Ori: QHI62753.1 Gene: rfbB Feature: domain Description: RfbB Location: 729192-730239 bp Feature: domain Description: RfbB Location: 7291 92-730239 bp Feature: gene Location: 730244-731152 bp Ori: QHI62754.1 Gene: rfbD Feature: domain Description: rmlD Location: 730253-731129 bp Feature: domain Description: rmlD Location: 730253-731 1 29 bp Feature: gene Location: 5652964-5654415 bp Ori: QHI67126.1 Feature: domain Description: AdoMet_MTases Location: 5653087-5653453 bp Feature: domain Description: AdoMet_MTases Location: 5653087-5653453 bp Feature: gene Location: 5654520-5655524 bp Feature: domain Description: DEXHc_Snf Location: 5654712-5654958 bp Feature: domain Description: DEXHc_Snf Location: 565471 2-5654958 bp Feature: gene Location: 5656142-5657860 bp Ori: QHI67127.1 Gene: ltrA Feature: domain Description: RVT_N Location: 5656199-5656436 bp Feature: domain Description: RVT_N Location: 56561 99-5656436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5656487-5657138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5656487-56571 38 bp Feature: domain Description: GIIM Note: maturase Location: 5657192-5657423 bp Feature: domain Description: GIIM Note: maturase Location: 56571 92-5657423 bp Feature: domain Description: HNHc Note: nucleases Location: 5657657-5657813 bp Feature: domain Description: HNHc Note: nucleases Location: 5657657-565781 3 bp Feature: gene Location: 5657943-5659187 bp Feature: domain Description: KOG0387 Location: 5657967-5658093 bp Feature: domain Description: KOG0387 Location: 5657967-5658093 bp Feature: domain Description: SF2_C_SNF Location: 5658651-5659023 bp Feature: domain Description: SF2_C_SNF Location: 5658651 -5659023 bp Feature: gene Location: 5659511-5660737 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ABC_ATPase (pfam09818), RVT-Retrons, RfbB (COG1088), rmlD (TIGR01214), AdoMet_MTases (cl17173), DEXHc_Snf (cd17919), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)
KOG0387 (KOG0387, Transcription-coupled repair protein CSB/RAD26 (contains SNF2 family DNA-dependent ATPase domain) ), SF2_C_SNF (cd18793)