myRT

myRT report for GCA_009906895.1_ASM990689v1

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Seq: CP047648.1 Klebsiella pneumoniae strain 156070 chromosome, complete genome (5415677 bp)
Overview 1 RT 1: 1213371-1219104 bp 2 RT 2: 1989693-1992942 bp 3 RT 3: 2316587-2322995 bp 4 RT 4: 2391717-2395825 bp 5 RT 5: 3837111-3841992 bp 6 RT 6: 4267698-4274617 bp Neighborhood of RT #1 [1213371, 1219109] dam Phage_GPA RVT-GII DinI Neighborhood of RT #2 [1989693, 1993334] YbjK int RVT-GII Neighborhood of RT #3 [2316587, 2322995] AbiH PRK05318 RVT-GII PRK10597 Neighborhood of RT #4 [2391717, 2395827] DinI RVT-GII PRK10276 umuC Neighborhood of RT #5 [3837111, 3841997] YccC PRK10016 RVT-GII dacD Neighborhood of RT #6 [4267698, 4274617] Wzy_C PHA02515 RVT-GII Feature: gene Location: 1213371-1214222 bp Feature: domain Description: dam Location: 1213374-1214145 bp Feature: domain Description: dam Location: 1 21 3374-1 21 41 45 bp Feature: gene Location: 1214219-1216603 bp Feature: domain Description: Phage_GPA Location: 1214783-1215749 bp Feature: domain Description: Phage_GPA Location: 1 21 4783-1 21 5749 bp Feature: gene Location: 1217081-1218568 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1217486-1218176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 21 7486-1 21 81 76 bp Feature: gene Location: 1218676-1218864 bp Feature: gene Location: 1218876-1219109 bp Feature: domain Description: DinI Location: 1218921-1219104 bp Feature: domain Description: DinI Location: 1 21 8921 -1 21 91 04 bp Feature: gene Location: 1989693-1990256 bp Feature: domain Description: YbjK Location: 1989699-1990236 bp Feature: domain Description: YbjK Location: 1 989699-1 990236 bp Feature: gene Location: 1990379-1991431 bp Feature: domain Description: int Location: 1990382-1991381 bp Feature: domain Description: int Location: 1 990382-1 991 381 bp Feature: gene Location: 1991847-1993334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1992252-1992942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 992252-1 992942 bp Feature: gene Location: 2316587-2317456 bp Feature: domain Description: AbiH Location: 2316596-2317364 bp Feature: domain Description: AbiH Location: 231 6596-231 7364 bp Feature: gene Location: 2318695-2320056 bp Feature: domain Description: PRK05318 Location: 2318719-2320018 bp Feature: domain Description: PRK0531 8 Location: 231 871 9-232001 8 bp Feature: gene Location: 2320894-2322381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2321299-2321989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2321 299-2321 989 bp Feature: gene Location: 2322460-2322693 bp Feature: domain Description: PRK10597 Location: 2322463-2322688 bp Feature: domain Description: PRK1 0597 Location: 2322463-2322688 bp Feature: gene Location: 2322738-2322995 bp Feature: gene Location: 2391717-2391959 bp Feature: domain Description: DinI Location: 2391768-2391948 bp Feature: domain Description: DinI Location: 2391 768-2391 948 bp Feature: gene Location: 2391974-2392120 bp Feature: gene Location: 2392574-2394061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2392979-2393669 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2392979-2393669 bp Feature: gene Location: 2394140-2394559 bp Feature: domain Description: PRK10276 Location: 2394143-2394554 bp Feature: domain Description: PRK1 0276 Location: 23941 43-2394554 bp Feature: gene Location: 2394562-2395827 bp Feature: domain Description: umuC Location: 2394565-2395825 bp Feature: domain Description: umuC Location: 2394565-2395825 bp Feature: gene Location: 3837111-3838169 bp Feature: domain Description: YccC Location: 3837117-3838155 bp Feature: domain Description: YccC Location: 38371 1 7-38381 55 bp Feature: gene Location: 3838268-3838741 bp Feature: domain Description: PRK10016 Location: 3838271-3838730 bp Feature: domain Description: PRK1 001 6 Location: 3838271 -3838730 bp Feature: gene Location: 3838823-3840307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3839225-3839915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3839225-383991 5 bp Feature: gene Location: 3840316-3840483 bp Feature: gene Location: 3840828-3841997 bp Feature: domain Description: dacD Location: 3840837-3841992 bp Feature: domain Description: dacD Location: 3840837-3841 992 bp Feature: gene Location: 4267698-4268366 bp Feature: domain Description: Wzy_C Location: 4267707-4268136 bp Feature: domain Description: Wzy_C Location: 4267707-42681 36 bp Feature: gene Location: 4268683-4271340 bp Feature: domain Description: PHA02515 Location: 4268695-4269040 bp Feature: domain Description: PHA0251 5 Location: 4268695-4269040 bp Feature: gene Location: 4271879-4273366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4272284-4272974 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4272284-4272974 bp Feature: gene Location: 4273463-4273801 bp Feature: gene Location: 4273997-4274617 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dam (TIGR00571), Phage_GPA (pfam05840), RVT-GII, DinI (pfam06183), YbjK (COG3226), int (PHA02601), AbiH (pfam14253), PRK05318 (deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional), PRK10597 (DNA damage-inducible protein I; Provisional), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)
umuC (PRK03609), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), Wzy_C (pfam04932), PHA02515 (hypothetical protein; Provisional)