myRT

myRT report for GCA_009909305.1_ASM990930v1

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Seq: CP047677.1 Klebsiella pneumoniae subsp. pneumoniae strain KUH-KPNHVL1 chromosome, complete genome (5382236 bp)
Overview 1 RT 1: 597935-603410 bp 2 RT 2: 2097719-2104286 bp 3 RT 3: 2174430-2179847 bp 4 RT 4: 3622089-3628571 bp Neighborhood of RT #1 [597935, 603424] HTH_XRE HTH_XRE RVT-UG2 traC_PFL_4706 conj_conj_conj_TIGR03751 Neighborhood of RT #2 [2097719, 2104286] FhlA EAL YncE YncE RVT-GII PRK10597 Neighborhood of RT #3 [2174430, 2179849] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [3622089, 3628573] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 597935-598165 bp Ori: QHJ14612.1 Feature: domain Description: HTH_XRE Location: 597977-598145 bp Feature: domain Description: HTH_XRE Location: 597977-5981 45 bp Feature: gene Location: 598248-598475 bp Ori: QHJ14613.1 Feature: domain Description: HTH_XRE Location: 598290-598452 bp Feature: domain Description: HTH_XRE Location: 598290-598452 bp Feature: gene Location: 598673-599950 bp Ori: QHJ14614.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 598871-599657 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 598871 -599657 bp Feature: gene Location: 600438-603068 bp Ori: QHJ14615.1 Feature: domain Description: traC_PFL_4706 Location: 600477-603057 bp Feature: domain Description: traC_PFL_4706 Location: 600477-603057 bp Feature: gene Location: 603065-603424 bp Ori: QHJ14616.1 Feature: domain Description: conj_conj_conj_TIGR03751 Location: 603083-603410 bp Feature: domain Description: conj_conj_conj_TIGR03751 Location: 603083-60341 0 bp Feature: gene Location: 2097719-2099482 bp Ori: QHJ15890.1 Feature: domain Description: FhlA Location: 2097788-2098181 bp Feature: domain Description: FhlA Location: 2097788-20981 81 bp Feature: domain Description: EAL Location: 2098724-2099438 bp Feature: domain Description: EAL Location: 2098724-2099438 bp Feature: gene Location: 2099826-2101187 bp Ori: QHJ15891.1 Feature: domain Description: YncE Location: 2100234-2100642 bp Feature: domain Description: YncE Location: 21 00234-21 00642 bp Feature: domain Description: YncE Location: 2100711-2101131 bp Feature: domain Description: YncE Location: 21 0071 1 -21 01 1 31 bp Feature: gene Location: 2102188-2103672 bp Ori: QHJ18846.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2102590-2103280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 02590-21 03280 bp Feature: gene Location: 2103751-2103984 bp Ori: QHJ15892.1 Feature: domain Description: PRK10597 Location: 2103754-2103979 bp Feature: domain Description: PRK1 0597 Location: 21 03754-21 03979 bp Feature: gene Location: 2103996-2104286 bp Feature: gene Location: 2174430-2175569 bp Ori: QHJ15963.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 2174613-2175513 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 21 7461 3-21 7551 3 bp Feature: gene Location: 2175740-2175982 bp Ori: QHJ15964.1 Feature: domain Description: DinI Location: 2175791-2175971 bp Feature: domain Description: DinI Location: 21 75791 -21 75971 bp Feature: gene Location: 2176273-2177757 bp Ori: QHJ18851.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2176675-2177365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 76675-21 77365 bp Feature: gene Location: 2178162-2178581 bp Ori: QHJ15965.1 Gene: umuD Feature: domain Description: PRK10276 Location: 2178165-2178576 bp Feature: domain Description: PRK1 0276 Location: 21 781 65-21 78576 bp Feature: gene Location: 2178584-2179849 bp Ori: QHJ15966.1 Gene: umuC Feature: domain Description: umuC Location: 2178587-2179847 bp Feature: domain Description: umuC Location: 21 78587-21 79847 bp Feature: gene Location: 3622089-3623147 bp Ori: QHJ17198.1 Feature: domain Description: YccC Location: 3622095-3623133 bp Feature: domain Description: YccC Location: 3622095-36231 33 bp Feature: gene Location: 3623246-3623719 bp Ori: QHJ17199.1 Gene: sbmC Feature: domain Description: PRK10016 Location: 3623249-3623708 bp Feature: domain Description: PRK1 001 6 Location: 3623249-3623708 bp Feature: gene Location: 3623801-3625285 bp Ori: QHJ18928.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3624203-3624893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3624203-3624893 bp Feature: gene Location: 3625805-3626974 bp Ori: QHJ17200.1 Gene: dacD Feature: domain Description: dacD Location: 3625814-3626969 bp Feature: domain Description: dacD Location: 362581 4-3626969 bp Feature: gene Location: 3627149-3628573 bp Ori: QHJ17201.1 Gene: sbcB Feature: domain Description: SbcB Location: 3627155-3628571 bp Feature: domain Description: SbcB Location: 36271 55-3628571 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-UG2, traC_PFL_4706 (TIGR03744), conj_conj_conj_TIGR03751, FhlA (COG3604), EAL (smart00052), YncE (COG3391), RVT-GII, PRK10597 (DNA damage-inducible protein I; Provisional), GT9_LPS_heptosyltransferase (cd03789)
DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)